RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PANK3Q9H999 370 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 SLC12A6Q9UHW9 1150 aa4.96□□□□□ -1.62
PTCD3-205ENST00000464541 IGHV3OR16-10A0A075B7F0 116 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 NKX6-3A6NJ46 265 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 EPM2AB3EWF7 344 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 TFECO14948 347 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-205ENST00000464541 GBAP04062 536 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 RBMS1P29558 406 aaKnown RBP4.95□□□□□ -1.62
PTCD3-205ENST00000464541 CLDN17P56750 224 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 TAZQ16635 292 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 FAM166AQ6J272 317 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 SPATA21Q7Z572 469 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 PRUNE1Q86TP1 453 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 METTL4Q8N3J2 472 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 GBP5Q96PP8 586 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 LGMNQ99538 433 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 PYGO2Q9BRQ0 406 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 GPATCH1Q9BRR8 931 aaKnown RBP4.95□□□□□ -1.62
PTCD3-205ENST00000464541 PI4K2AQ9BTU6 479 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 IARS2Q9NSE4 1012 aaKnown RBP4.95□□□□□ -1.62
PTCD3-205ENST00000464541 AGTPBP1Q9UPW5 1226 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 MOB4Q9Y3A3 225 aa4.95□□□□□ -1.62
PTCD3-205ENST00000464541 IQCMA0A1B0GVH7 501 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 NPIPA3F8WFD2 350 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 WDR46O15213 610 aaKnown RBP4.94□□□□□ -1.62
PTCD3-205ENST00000464541 FLRT2O43155 660 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 PRAF2O60831 178 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 CRLF1O75462 422 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 VIMP08670 466 aaKnown RBP4.94□□□□□ -1.62
PTCD3-205ENST00000464541 GP5P40197 560 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 ATP1A1-AS1Q5TC04 95 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 TXNRD3NBQ6F5E7 133 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 LCLAT1Q6UWP7 414 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 METTL23Q86XA0 190 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 ZFAND4Q86XD8 727 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 C4orf19Q8IY42 314 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 LYG1Q8N1E2 194 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 Q8NBF4 154 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 OR10G7Q8NGN6 311 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 NCOA7Q8NI08 942 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 LRRC15Q8TF66 581 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 HEXDCQ8WVB3 486 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 OMA1Q96E52 524 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 LMAN1LQ9HAT1 526 aa4.94□□□□□ -1.62
PTCD3-205ENST00000464541 MYH15Q9Y2K3 1946 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 CCER2I3L3R5 266 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 K7EQD1 137 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 FCGR3BO75015 233 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 TBCAO75347 108 aaKnown RBP4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SAP30O75446 220 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 TSPY3P0CV98 308 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 TSPY8P0CW00 308 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SCG2P13521 617 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 PDHA2P29803 388 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 OR3A3P47888 321 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SLC8A3P57103 927 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 RAPSNQ13702 412 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SNAI3Q3KNW1 292 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SPECC1Q5M775 1068 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 OR4C11Q6IEV9 310 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 C3P1Q6ZMU1 363 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 MACC1Q6ZN28 852 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 TCEANCQ8N8B7 351 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 FAM222BQ8WU58 562 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 CASP10Q92851 521 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 FAM162AQ96A26 154 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 SLC45A3Q96JT2 553 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 LURAP1Q96LR2 239 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 DNAI2Q9GZS0 605 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 UBQLN3Q9H347 655 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 C10orf88Q9H8K7 445 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 MUTYHQ9UIF7 546 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 KLK13Q9UKR3 277 aa4.93□□□□□ -1.62
PTCD3-205ENST00000464541 COL5A2P05997 1499 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-205ENST00000464541 TRAV18A0A075B6X5 111 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 A0A087WZ39 114 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 ARHGEF37A1IGU5 675 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 C5orf52A6NGY3 159 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 ASB14A6NK59 587 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 NPIPB9F8W1W9 429 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 PI4K2BG5E9Z4 385 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 MOCS2O96007 188 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 RPN1P04843 607 aaKnown RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 KRT3P12035 628 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 IFNAR1P17181 557 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 TIA1P31483 386 aaKnown RBP eCLIP4.92□□□□□ -1.623e-7■■■□□ 14.8
PTCD3-205ENST00000464541 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 CRKLP46109 303 aaKnown RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 DUSP5Q16690 384 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 FAM106AQ4KMX7 169 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 LBHQ53QV2 105 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 TRAT1Q6PIZ9 186 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 PAQR6Q6TCH4 344 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 SPATA19Q7Z5L4 167 aa4.92□□□□□ -1.62
PTCD3-205ENST00000464541 DZIP1Q86YF9 867 aaKnown RBP4.92□□□□□ -1.62
PTCD3-205ENST00000464541 ANKRD9Q96BM1 317 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms