RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PDPRQ8NCN5 879 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 OR4K1Q8NGD4 311 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 APOBEC4Q8WW27 367 aaKnown RBP16.22■□□□□ 0.19
VPS52-215ENST00000464425 THAP11Q96EK4 314 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 SEMA4CQ9C0C4 833 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 ZNF358Q9NW07 568 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 MKS1Q9NXB0 559 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 MAN2B2Q9Y2E5 1009 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 KCNE2Q9Y6J6 123 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 PIEZO2Q9H5I5 2752 aa16.22■□□□□ 0.19
VPS52-215ENST00000464425 SUPT3HB4E1H0 165 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 GLRA3O75311 464 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 SUPT3HO75486 399 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 S100BP04271 92 aaPredicted RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 MYZAPP0CAP1 466 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 MTHFD2P13995 350 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 OTX2P32243 289 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 FOLR3P41439 243 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 SLC6A12P48065 614 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 HSPA7P48741 367 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 EMP3P54852 163 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 POLE2P56282 527 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 NXPE4Q6UWF7 544 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 TMPRSS11BQ86T26 416 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 TMEM151AQ8N4L1 468 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 MFSD9Q8NBP5 474 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 LSM14AQ8ND56 463 aaKnown RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 ZNF740Q8NDX6 193 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 SLC13A3Q8WWT9 602 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 TMEM79Q9BSE2 394 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 STMN4Q9H169 189 aaPredicted RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 SPNS1Q9H2V7 528 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 MRPL46Q9H2W6 279 aaKnown RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 ZNF304Q9HCX3 659 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 NUDT4Q9NZJ9 180 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 TMEM216Q9P0N5 145 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 CTSFQ9UBX1 484 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 PTBP2Q9UKA9 531 aaKnown RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 GRID1Q9ULK0 1009 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 TMCO1Q9UM00 188 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 MRPS2Q9Y399 296 aaKnown RBP16.21■□□□□ 0.19
VPS52-215ENST00000464425 KCNMB2Q9Y691 235 aa16.21■□□□□ 0.19
VPS52-215ENST00000464425 CCDC88CQ9P219 2028 aa16.21■□□□□ 0.18
VPS52-215ENST00000464425 GOLGA6L10A6NI86 522 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 UBXN8O00124 270 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 COPEO14579 308 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 MAP2K7O14733 419 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 KLK8O60259 260 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 ONECUT2O95948 504 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SERPIND1P05546 499 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 CD63P08962 238 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 VARSP26640 1264 aaKnown RBP16.2■□□□□ 0.18
VPS52-215ENST00000464425 SNRPNP63162 240 aaKnown RBP16.2■□□□□ 0.18
VPS52-215ENST00000464425 NKG7Q16617 165 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 GARNL3Q5VVW2 1013 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 PRMT9Q6P2P2 845 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SHISA6Q6ZSJ9 500 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 ASPGQ86U10 573 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SRRM1Q8IYB3 904 aaKnown RBP16.2■□□□□ 0.18
VPS52-215ENST00000464425 KLHDC8AQ8IYD2 350 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 C4orf33Q8N1A6 199 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 ARHGEF39Q8N4T4 335 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 BANPQ8N9N5 519 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SNX31Q8N9S9 440 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 OR2Y1Q8NGV0 311 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 ADAMTS17Q8TE56 1095 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 THAP4Q8WY91 577 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SCYL1Q96KG9 808 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 SMC6Q96SB8 1091 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 YIPF2Q9BWQ6 316 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 CNOT10Q9H9A5 744 aaKnown RBP16.2■□□□□ 0.18
VPS52-215ENST00000464425 PELI2Q9HAT8 420 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 CDC14AQ9UNH5 594 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 ACTL7BQ9Y614 415 aa16.2■□□□□ 0.18
VPS52-215ENST00000464425 A0A0A6YYC8 382 aaPredicted RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 TRBC2A0A5B9 178 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 ARGFXA6NJG6 315 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 I3L1I5 382 aaPredicted RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 AGPSO00116 658 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 TK2O00142 265 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 FFAR3O14843 346 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 GPR42O15529 346 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 FOXS1O43638 330 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 STK16O75716 305 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 IPO13O94829 963 aaKnown RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 ALBP02768 609 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 GNAZP19086 355 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 FBLP22087 321 aaKnown RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 CDC16Q13042 620 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 CHAF1BQ13112 559 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 SSPNQ14714 243 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 RBBP5Q15291 538 aaKnown RBP16.19■□□□□ 0.18
VPS52-215ENST00000464425 NDUFA9Q16795 377 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 CCDC153Q494R4 210 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 PRSS58Q8IYP2 241 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 TBC1D19Q8N5T2 526 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 KCT2Q8NC54 265 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 CAMKVQ8NCB2 501 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 ZCCHC10Q8TBK6 192 aa16.19■□□□□ 0.18
VPS52-215ENST00000464425 FKBP10Q96AY3 582 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms