RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RPL10P27635 214 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SFSWAPQ12872 951 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 LPCAT2Q7L5N7 544 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CALHM3Q86XJ0 350 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 GPR156Q8NFN8 814 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CDC26Q8NHZ8 85 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 DNASE1L2Q92874 299 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SPNS1Q9H2V7 528 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CEPT1Q9Y6K0 416 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CACNB4O00305 520 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 PCDH7O60245 1069 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SCELO95171 688 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 HPCAL1P37235 193 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CDKN2CP42773 168 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 WNT3P56703 355 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 C17orf64Q86WR6 236 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 MICU2Q8IYU8 434 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CBR4Q8N4T8 237 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 RAB42Q8N4Z0 105 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 C2orf73Q8N5S3 287 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 ADAMTS16Q8TE57 1224 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SMPDL3AQ92484 453 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 FAM120BQ96EK7 910 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 FERD3LQ96RJ6 166 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 MENTQ9BUN1 341 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 ADI1Q9BV57 179 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 BTBD1Q9H0C5 482 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 OSGEPL1Q9H4B0 414 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 RSL24D1Q9UHA3 163 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 MYO10Q9HD67 2058 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 ZNF701M0R085 212 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 FPGTO14772 594 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 SCN2BO60939 215 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 GSNP06396 782 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 MAT2AP31153 395 aaKnown RBP20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 CDK9P50750 372 aaKnown RBP20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 MEF2AQ02078 507 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 MERTKQ12866 999 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 PYCR3Q53H96 274 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 GCNT7Q6ZNI0 430 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 CAMKMTQ7Z624 323 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM129CQ86XR2 697 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 PHACTR4Q8IZ21 702 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 OR52E4Q8NGH9 312 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 INSM2Q96T92 566 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 CAAP1Q9H8G2 361 aa20.89■□□□□ 0.93
PDLIM2-216ENST00000464275 GNG14A0A1W2PPG7 69 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TRIM64A6NGJ6 449 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TPST1O60507 370 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 GZMMP51124 257 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 ABHD18Q0P651 414 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TMIGD1Q6UXZ0 262 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 FIG4Q92562 907 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 C12orf66Q96MD2 445 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 DUSP26Q9BV47 211 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 YTHDF1Q9BYJ9 559 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 ETAA1Q9NY74 926 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TAC3Q9UHF0 121 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 ADGRE2Q9UHX3 823 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 WDR37Q9Y2I8 494 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 BRWD1Q9NSI6 2320 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SAC3D1A6NKF1 404 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 C2CD4DB7Z1M9 353 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SLC31A1O15431 190 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 B3GALT4O96024 378 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TGFB1P01137 390 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 HOXC4P09017 264 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 ACADMP11310 421 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 CXCR2P25025 360 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 PPP2CBP62714 309 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 PPP2CAP67775 309 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 HKDC1Q2TB90 917 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SLC36A3Q495N2 470 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 CPTPQ5TA50 214 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 DUS1LQ6P1R4 473 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 FKBP9P1Q75LS8 142 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 EPHX4Q8IUS5 362 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 FAM47BQ8NA70 645 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SH3KBP1Q96B97 665 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 CXorf40BQ96DE9 158 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SCARF2Q96GP6 870 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 PANX1Q96RD7 426 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 SEPHS2Q99611 448 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 TBCDQ9BTW9 1192 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 FZD3Q9NPG1 666 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 MOSPD1Q9UJG1 213 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 KCNK6Q9Y257 313 aa20.88■□□□□ 0.93
PDLIM2-216ENST00000464275 PLXND1Q9Y4D7 1925 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 RNF103-CHMP3A0A140T963 221 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 PRR19A6NJB7 356 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 EVPLLA8MZ36 301 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 CXCR6O00574 342 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 IDSP22304 550 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 PTX3P26022 381 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ESRRGP62508 458 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 CTBSQ01459 385 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ZNF763Q0D2J5 394 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 EOGTQ5NDL2 527 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ANXA8L1Q5VT79 327 aa20.87■□□□□ 0.93
PDLIM2-216ENST00000464275 ARMCX6Q7L4S7 300 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms