RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 MFSD9Q8NBP5 474 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 ZCCHC10Q8TBK6 192 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 PYCR2Q96C36 320 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 LRRC39Q96DD0 335 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 RUNDC3BQ96NL0 473 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 OLFM1Q99784 485 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 WDR83Q9BRX9 315 aaKnown RBP17.83■□□□□ 0.44
SF3A1-205ENST00000463818 TRIM51Q9BSJ1 452 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 FAM129AQ9BZQ8 928 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 ANKHQ9HCJ1 492 aa17.83■□□□□ 0.44
SF3A1-205ENST00000463818 CORO1CQ9ULV4 474 aaPredicted RBP17.83■□□□□ 0.44
SF3A1-205ENST00000463818 IGHV3-20A0A0C4DH32 117 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 PABPN1LA6NDY0 278 aaKnown RBP17.82■□□□□ 0.44
SF3A1-205ENST00000463818 OR2W5A6NFC9 320 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 F10P00742 488 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 TNFSF10P50591 281 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 AP1S2P56377 157 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 MEF2AQ02078 507 aaPredicted RBP17.82■□□□□ 0.44
SF3A1-205ENST00000463818 FAM45BPQ6NSW5 357 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 CPEB2Q7Z5Q1 589 aaKnown RBP17.82■□□□□ 0.44
SF3A1-205ENST00000463818 PDSS2Q86YH6 399 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 ANKMY2Q8IV38 441 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 ABHD11Q8NFV4 315 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 OR4K1Q8NGD4 311 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 OR56A3Q8NH54 315 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 FAM45AQ8TCE6 357 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 FBXL8Q96CD0 374 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 PDLIM5Q96HC4 596 aaKnown RBP17.82■□□□□ 0.44
SF3A1-205ENST00000463818 C5orf34Q96MH7 638 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 OR4K3Q96R72 315 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 TRIM31Q9BZY9 425 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 SAR1BQ9Y6B6 198 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 HIVEP3Q5T1R4 2406 aa17.82■□□□□ 0.44
SF3A1-205ENST00000463818 UTP20O75691 2785 aaKnown RBP17.82■□□□□ 0.44
SF3A1-205ENST00000463818 TRAV17A0A0B4J275 112 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 E2F3O00716 465 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 TTI1O43156 1089 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 OR1F1O43749 312 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 GUCA1CO95843 209 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 EDN3P14138 238 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 AP2B1P63010 937 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 FRG1Q14331 258 aaKnown RBP17.81■□□□□ 0.44
SF3A1-205ENST00000463818 TMEM207Q6UWW9 146 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 LANCL3Q6ZV70 420 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 ATL1Q8WXF7 558 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 MAGEB10Q96LZ2 347 aaPredicted RBP17.81■□□□□ 0.44
SF3A1-205ENST00000463818 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.81■□□□□ 0.44
SF3A1-205ENST00000463818 STMN3Q9NZ72 180 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 IKZF3Q9UKT9 509 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 OSGIN2Q9Y236 505 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 NAALAD2Q9Y3Q0 740 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 SLC22A7Q9Y694 548 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 POLEQ07864 2286 aa17.81■□□□□ 0.44
SF3A1-205ENST00000463818 NBPF19A0A087WUL8 3843 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 RDH16O75452 317 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 SEC24DO94855 1032 aaPredicted RBP17.8■□□□□ 0.44
SF3A1-205ENST00000463818 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
SF3A1-205ENST00000463818 WDPCPO95876 746 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 CYC1P08574 325 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 ENO2P09104 434 aaPredicted RBP17.8■□□□□ 0.44
SF3A1-205ENST00000463818 SLC35G6P0C7Q6 338 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 SAT1P21673 171 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 MGAT5Q09328 741 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 CATSPEREQ5SY80 951 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 FAM180AQ6UWF9 173 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 ANKRD37Q7Z713 158 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 BCORP1Q8N888 145 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 ZNF740Q8NDX6 193 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 MOCOSQ96EN8 888 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 NAPGQ99747 312 aaPredicted RBP17.8■□□□□ 0.44
SF3A1-205ENST00000463818 SARGQ9BW04 601 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 ZFATQ9P243 1243 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 C19orf25Q9UFG5 118 aaPredicted RBP17.8■□□□□ 0.44
SF3A1-205ENST00000463818 PSAT1Q9Y617 370 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 NUP210LQ5VU65 1888 aa17.8■□□□□ 0.44
SF3A1-205ENST00000463818 TRBC2A0A5B9 178 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 A8MUI8 341 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 CCDC188H7C350 402 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 TP73O15350 636 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 CLDN1O95832 211 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 SERPIND1P05546 499 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 PAFAH1B1P43034 410 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 PDIA2Q13087 525 aaKnown RBP17.79■□□□□ 0.44
SF3A1-205ENST00000463818 PWP1Q13610 501 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 CSHL1Q14406 222 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 HERC3Q15034 1050 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 ABHD17BQ5VST6 288 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 MAMDC2Q7Z304 686 aaPredicted RBP17.79■□□□□ 0.44
SF3A1-205ENST00000463818 AFAP1L2Q8N4X5 818 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 TBC1D19Q8N5T2 526 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 FBXO36Q8NEA4 188 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 PLPP5Q8NEB5 264 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 SLC5A11Q8WWX8 675 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 PEX11GQ96HA9 241 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 TAAR6Q96RI8 345 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 SLX1AQ9BQ83 275 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 OLAHQ9NV23 265 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 MOCS1Q9NZB8 636 aa17.79■□□□□ 0.44
SF3A1-205ENST00000463818 ZNF860A6NHJ4 632 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms