RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 UQCRHLA0A096LP55 91 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 EDDM13A0A1B0GTR0 161 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CFAP69A5D8W1 941 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TMX2-CTNND1H3BSU7 103 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 FFAR2O15552 330 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 AP2A1O95782 977 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 C1QAP02745 245 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CSF2P04141 144 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 UGT2B4P06133 528 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 APRTP07741 180 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 UQCRHP07919 91 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 LIPCP11150 499 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 KELP23276 732 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 UGT1A5P35504 534 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PGGT1BP53609 377 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TAS2R38P59533 333 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 GPX6P59796 221 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ST8SIA6P61647 398 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 HNRNPKP61978 463 aaKnown RBP eCLIP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 RALGDSQ12967 914 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SLC12A1Q13621 1099 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TUBB2AQ13885 445 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 KLF9Q13886 244 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ELAVL3Q14576 367 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 EFTUD2Q15029 972 aaKnown RBP eCLIP3.54□□□□□ -1.841e-6■■□□□ 14.4
SCFD1-204ENST00000463622 CDKN3Q16667 212 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PARP6Q2NL67 630 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF284Q2VY69 593 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MYLK3Q32MK0 819 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZIK1Q3SY52 487 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ACCSLQ4AC99 568 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SETMARQ53H47 684 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 INO80DQ53TQ3 878 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CARD16Q5EG05 197 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 AARS2Q5JTZ9 985 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SIRPB2Q5JXA9 342 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SFRP4Q6FHJ7 346 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 RETSATQ6NUM9 610 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 GUSBP11Q6P575 273 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ANKRD16Q6P6B7 361 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 FBXO38Q6PIJ6 1188 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 EFL1Q7Z2Z2 1120 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SRLQ86TD4 932 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TICAM1Q8IUC6 712 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 FBXO39Q8N4B4 442 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF557Q8N988 423 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC89Q8N998 374 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 LPCAT1Q8NF37 534 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 AENQ8WTP8 325 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 UBE2Q2Q8WVN8 375 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 IFT81Q8WYA0 676 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 MIB2Q96AX9 1013 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ECHDC3Q96DC8 303 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SNF8Q96H20 258 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 BMFQ96LC9 184 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 C9orf72Q96LT7 481 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF599Q96NL3 588 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 NUDCD1Q96RS6 583 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TUBB2BQ9BVA1 445 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 C1QTNF7Q9BXJ2 289 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 POLR1EQ9GZS1 481 aaKnown RBP3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SLC25A51Q9H1U9 297 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SMYD2Q9NRG4 433 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 TMEM51Q9NW97 253 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PAK5Q9P286 719 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 SLC25A13Q9UJS0 675 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 RAB21Q9UL25 225 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CA5BQ9Y2D0 317 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 PLEKHM1Q9Y4G2 1056 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 CKAP5Q14008 2032 aa3.54□□□□□ -1.84
SCFD1-204ENST00000463622 ICE1Q9Y2F5 2266 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 UTP20O75691 2785 aaKnown RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 NBPF19A0A087WUL8 3843 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 CELSR2Q9HCU4 2923 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 LOC285095A0A1B0GVY8 99 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 CPED1A4D0V7 1026 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 OR51F1A6NGY5 319 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 NPIPB15A6NHN6 443 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 FOXO6A8MYZ6 492 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 E7ESA3 106 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 GAPDHSO14556 408 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 CASC3O15234 703 aaKnown RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 SLC31A1O15431 190 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 UGT1A9O60656 530 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 NEBLO76041 1014 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 IGSF6O95976 241 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 GAS8O95995 478 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 GSRP00390 522 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 SLC4A1P02730 911 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 TPSB2P20231 275 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 NMBRP28336 390 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 MAT2AP31153 395 aaKnown RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 STIP1P31948 543 aaKnown RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 PSMD8P48556 350 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 RENBPP51606 427 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 ZFP36L1Q07352 338 aaKnown RBP3.53□□□□□ -1.84
SCFD1-204ENST00000463622 CNTN1Q12860 1018 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 E2F2Q14209 437 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 FGL2Q14314 439 aa3.53□□□□□ -1.84
SCFD1-204ENST00000463622 FZD2Q14332 565 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 333.8 ms