RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ACSF3Q4G176 576 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-211ENST00000463372 KCTD11Q693B1 232 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 OR51Q1Q8NH59 317 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 MIPEPQ99797 713 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 SLC25A51Q9H1U9 297 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 IL1RL2Q9HB29 575 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
C9orf3-211ENST00000463372 LMX1BO60663 402 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 ITGA2P17301 1181 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 HNF1AP20823 631 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 ENDOUP21128 410 aaKnown RBP12.36□□□□□ -0.43
C9orf3-211ENST00000463372 CRYGSP22914 178 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 FAM53BQ14153 422 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 PTPRCAPQ14761 206 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 PAFAH1B3Q15102 231 aaKnown RBP12.36□□□□□ -0.43
C9orf3-211ENST00000463372 SF3B4Q15427 424 aaKnown RBP eCLIP12.36□□□□□ -0.432e-8■■□□□ 13.7
C9orf3-211ENST00000463372 NDUFA9Q16795 377 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 NCBP2-AS2Q69YL0 99 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 KIAA0408Q6ZU52 694 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
C9orf3-211ENST00000463372 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 SPATA22Q8NHS9 363 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 MCOLN3Q8TDD5 553 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 NTNG2Q96CW9 530 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 C1orf159Q96HA4 380 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 IL17FQ96PD4 163 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 FAM173AQ9BQD7 235 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 WDR83Q9BRX9 315 aaKnown RBP12.36□□□□□ -0.43
C9orf3-211ENST00000463372 RAB11FIP5Q9BXF6 653 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 ANGPTL4Q9BY76 406 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 CEP41Q9BYV8 373 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 CIDEBQ9UHD4 219 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 SLC39A10Q9ULF5 831 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 KLK4Q9Y5K2 254 aa12.36□□□□□ -0.43
C9orf3-211ENST00000463372 A0A0G2JMM0 328 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 A0A1W2PPB8 328 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 A0A1W2PRS3 328 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 A8MVJ9 347 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 KIR3DP1A8MWS1 328 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 KDM4EB2RXH2 506 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-211ENST00000463372 G3V3Y1 287 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 H0YIG0 161 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 TXNDC9O14530 226 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 ADAM11O75078 769 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 RARAP10276 462 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 PTPN3P26045 913 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 PCK1P35558 622 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 SSR4P51571 173 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 MTTPP55157 894 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 RPS4XP62701 263 aaKnown RBP12.35□□□□□ -0.43
C9orf3-211ENST00000463372 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-211ENST00000463372 MPP1Q00013 466 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 NAA25Q14CX7 972 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 SYTL3Q4VX76 610 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 ABHD17CQ6PCB6 329 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 ARMC10Q8N2F6 343 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 SLC25A41Q8N5S1 370 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 RERGQ96A58 199 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-211ENST00000463372 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 ZNF696Q9H7X3 374 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
C9orf3-211ENST00000463372 TMEM191CA6NGB0 347 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 RPN2P04844 631 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 PSMB5P28074 263 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 COMPP49747 757 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-211ENST00000463372 ACTG1P63261 375 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 SIRPB2Q5JXA9 342 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 FAM182AQ5T1J6 154 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 CYB5R2Q6BCY4 276 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 LRRC17Q8N6Y2 441 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 OR2L3Q8NG85 312 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 OR9A4Q8NGU2 314 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 ELMO1Q92556 727 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 ART5Q96L15 291 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 QRFPRQ96P65 431 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 TNFRSF13CQ96RJ3 184 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 NDST4Q9H3R1 872 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 UBP1Q9NZI7 540 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 HCN3Q9P1Z3 774 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 FKBPLQ9UIM3 349 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 ALPK2Q86TB3 2170 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
C9orf3-211ENST00000463372 NINQ8N4C6 2090 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 CADP27708 2225 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms