RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 AFAP1L2Q8N4X5 818 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 TRPV3Q8NET8 790 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 TTLQ8NG68 377 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 MZB1Q8WU39 189 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.49□□□□□ -0.57
HPS1-206ENST00000462743 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 BBC3Q96PG8 261 aaPredicted RBP11.49□□□□□ -0.57
HPS1-206ENST00000462743 TGIF2Q9GZN2 237 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 CLK4Q9HAZ1 481 aaKnown RBP11.49□□□□□ -0.57
HPS1-206ENST00000462743 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
HPS1-206ENST00000462743 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
HPS1-206ENST00000462743 TNPO3Q9Y5L0 923 aaKnown RBP11.49□□□□□ -0.57
HPS1-206ENST00000462743 CDC14CA4D256 554 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SUPT3HB4E1H0 165 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 K7EPI3 171 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 UBXN8O00124 270 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 CLGNO14967 610 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SUPT3HO75486 399 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 IGHEP01854 428 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 TUBBP07437 444 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SERPINA6P08185 405 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SLC35G6P0C7Q6 338 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 EPORP19235 508 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 FOLR3P41439 243 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 OR1D4P47884 311 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 ALDH18A1P54886 795 aaKnown RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 VSNL1P62760 191 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 LAPTM5Q13571 262 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 IL10RAQ13651 578 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 NAA30Q147X3 362 aaPredicted RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 SETDB1Q15047 1291 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 DEFB109BQ30KR1 87 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 NIPAL1Q6NVV3 410 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 EMBQ6PCB8 327 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SH2D5Q6ZV89 423 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 MED25Q71SY5 747 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 TMPRSS11BQ86T26 416 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 RAB43Q86YS6 212 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 EXD3Q8N9H8 876 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 ANKRD53Q8N9V6 530 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 ZNF740Q8NDX6 193 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 CREB3L4Q8TEY5 395 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 AENQ8WTP8 325 aaKnown RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 COL26A1Q96A83 441 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 ESAMQ96AP7 390 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 TSNARE1Q96NA8 513 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SPSB2Q99619 263 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 MRPL57Q9BQC6 102 aaKnown RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 SLC6A16Q9GZN6 736 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 DRC3Q9H069 523 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SPNS1Q9H2V7 528 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 RHBGQ9H310 441 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 PSMC3IPQ9P2W1 217 aaPredicted RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 PTRH2Q9Y3E5 179 aaKnown RBP11.48□□□□□ -0.57
HPS1-206ENST00000462743 MAP4K5Q9Y4K4 846 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 SCN2AQ99250 2005 aa11.48□□□□□ -0.57
HPS1-206ENST00000462743 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 STX16O14662 325 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 PCDH17O14917 1159 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 UMODP07911 640 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 IL10P22301 178 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 MMP11P24347 488 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 VARSP26640 1264 aaKnown RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 AVPR1BP47901 424 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 GLRBP48167 497 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 AGTR2P50052 363 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 MEF2AQ02078 507 aaPredicted RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 OCA2Q04671 838 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 HYAL2Q12891 473 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 PDK4Q16654 411 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 ATP1A1-AS1Q5TC04 95 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 TMIGD1Q6UXZ0 262 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 KRT78Q8N1N4 520 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 DTWD1Q8N5C7 304 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 AMER3Q8N944 861 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 TMEM102Q8N9M5 508 aaPredicted RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 KCT2Q8NC54 265 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 STT3BQ8TCJ2 826 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 CAVIN3Q969G5 261 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 MOCOSQ96EN8 888 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 PTCD3Q96EY7 689 aaKnown RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 EFCAB11Q9BUY7 163 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 MKKSQ9NPJ1 570 aaPredicted RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 OPTCQ9UBM4 332 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 ZNF282Q9UDV7 671 aaPredicted RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 RAB21Q9UL25 225 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 ZNF490Q9ULM2 529 aaPredicted RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 MRPS2Q9Y399 296 aaKnown RBP11.47□□□□□ -0.57
HPS1-206ENST00000462743 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 ASB1Q9Y576 335 aa11.47□□□□□ -0.57
HPS1-206ENST00000462743 A0A0A6YYC8 382 aaPredicted RBP11.46□□□□□ -0.57
HPS1-206ENST00000462743 URADA6NGE7 173 aa11.46□□□□□ -0.57
HPS1-206ENST00000462743 I3L1I5 382 aaPredicted RBP11.46□□□□□ -0.57
HPS1-206ENST00000462743 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms