RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 GAB1Q13480 694 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 DDX39BQ13838 428 aaKnown RBP17.79■□□□□ 0.44
HPS3-204ENST00000462030 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 KCNA10Q16322 511 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 FBXO43Q4G163 708 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 SPANXN2Q5MJ10 180 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 LYPLAL1Q5VWZ2 237 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 CCDC190Q86UF4 302 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 OR8J2Q8NGG1 315 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 OR5M11Q96RB7 305 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 KCNS3Q9BQ31 491 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 CCM2Q9BSQ5 444 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 ATG10Q9H0Y0 220 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 ZW10O43264 779 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 OR1E2P47887 323 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 AP1S1P61966 158 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 IRF3Q14653 427 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 RGMBQ6NW40 437 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 TPGS1Q6ZTW0 290 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 MTERF1Q99551 399 aaKnown RBP17.79■□□□□ 0.44
HPS3-204ENST00000462030 CEP44Q9C0F1 390 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 AP3D1O14617 1153 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 IDH3BO43837 385 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 SH3BGRLO75368 114 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 KRT8P05787 483 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CBSLP0DN79 551 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 HLA-EP13747 358 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CD22P20273 847 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CBSP35520 551 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 ETV6P41212 452 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 NSG1P42857 185 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 OR2B6P58173 313 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 BCL2L1Q07817 233 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 FAM26DQ5JW98 314 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 NXNL2Q5VZ03 156 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 NAGSQ8N159 534 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 OR6F1Q8NGZ6 308 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 P2RY13Q9BPV8 354 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 DUSP26Q9BV47 211 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 MS4A12Q9NXJ0 267 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 MKLN1Q9UL63 735 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 N6AMT1Q9Y5N5 214 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 OR51B4Q9Y5P0 310 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CFAP20Q9Y6A4 193 aaKnown RBP17.78■□□□□ 0.44
HPS3-204ENST00000462030 ALPK3Q96L96 1907 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 A0A1W2PQ67 120 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
HPS3-204ENST00000462030 PCDH7O60245 1069 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 ADAMTS4O75173 837 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 APOA1P02647 267 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CTGFP29279 349 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 PIK3CBP42338 1070 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 CDH12P55289 794 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 SPIBQ01892 262 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 KRR1Q13601 381 aaKnown RBP17.78■□□□□ 0.44
HPS3-204ENST00000462030 RGNQ15493 299 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 EXOC3L2Q2M3D2 409 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 GPR33Q49SQ1 333 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 BCL7AQ4VC05 210 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 ATAD3CQ5T2N8 411 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 LGI4Q8N135 537 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 B3GNT7Q8NFL0 401 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 OR9Q2Q8NGE9 314 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 NDEL1Q9GZM8 345 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 ZNF221Q9UK13 617 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 TBC1D24Q9ULP9 559 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 TMEM98Q9Y2Y6 226 aa17.78■□□□□ 0.44
HPS3-204ENST00000462030 C1orf226A1L170 272 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 C2orf78A6NCI8 922 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 MED22Q15528 200 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 TSTQ16762 297 aaKnown RBP17.77■□□□□ 0.44
HPS3-204ENST00000462030 CYP27C1Q4G0S4 372 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 CDKL4Q5MAI5 379 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 SLX4IPQ5VYV7 408 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 FUT10Q6P4F1 479 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 RFLNAQ6ZTI6 216 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
HPS3-204ENST00000462030 OR4C15Q8NGM1 316 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 COPS8Q99627 209 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 DNAJC11Q9NVH1 559 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 DUSP12Q9UNI6 340 aa17.77■□□□□ 0.44
HPS3-204ENST00000462030 NPIPB15A6NHN6 443 aaPredicted RBP17.77■□□□□ 0.43
HPS3-204ENST00000462030 PDZK1P1A8MUH7 402 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 ADAMDEC1O15204 470 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 PRMT3O60678 531 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 SNX4O95219 450 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 HIST1H2AGP0C0S8 130 aaPredicted RBP17.77■□□□□ 0.43
HPS3-204ENST00000462030 POU2F1P14859 743 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 JUPP14923 745 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 RPL17P18621 184 aaKnown RBP17.77■□□□□ 0.43
HPS3-204ENST00000462030 HIST1H2ADP20671 130 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 FOXD4Q12950 439 aaPredicted RBP17.77■□□□□ 0.43
HPS3-204ENST00000462030 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 VASH1Q7L8A9 365 aaPredicted RBP17.77■□□□□ 0.43
HPS3-204ENST00000462030 APCDD1Q8J025 514 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms