RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TTLL10Q6ZVT0 673 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LCA5Q86VQ0 697 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TDRPQ86YL5 185 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CSNK1A1LQ8N752 337 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SNX31Q8N9S9 440 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CLEC1AQ8NC01 280 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR4K1Q8NGD4 311 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NEIL2Q969S2 332 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GBP5Q96PP8 586 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR2A5Q96R48 311 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR4K3Q96R72 315 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 AIF1LQ9BQI0 150 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CD244Q9BZW8 370 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PELI2Q9HAT8 420 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GPR83Q9NYM4 423 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GPRC5BQ9NZH0 403 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CDC14AQ9UNH5 594 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TLN1Q9Y490 2541 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 A0A1B0GX78 115 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TRBC2A0A5B9 178 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 A6NL46 340 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 UBXN8O00124 270 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TAPBPO15533 448 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CCNT2O60583 730 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 VPS4BO75351 444 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ALPPP05187 535 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GFAPP14136 432 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 VARSP26640 1264 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GMPRP36959 345 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GDF5P43026 501 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HSPA7P48741 367 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 IFFO1Q0D2I5 559 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RASA2Q15283 850 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ZNF385CQ66K41 422 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LRRC70Q7Z2Q7 622 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR2Y1Q8NGV0 311 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NACC2Q96BF6 587 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GPR78Q96P69 363 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SARGQ9BW04 601 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PITHD1Q9GZP4 211 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DHCR7Q9UBM7 475 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TBK1Q9UHD2 729 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RAB21Q9UL25 225 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TNPO3Q9Y5L0 923 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-207ENST00000461009 K7EM74 188 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR1F1O43749 312 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NRP2O60462 931 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SMIM24O75264 130 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CDH16O75309 829 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KLF7O75840 302 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CEACAM4O75871 244 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ALBP02768 609 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SHBGP04278 402 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CTSBP07858 339 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 C1GALT1C1LP0DN25 315 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KRT15P19012 456 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ITGAXP20702 1163 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ALDH18A1P54886 795 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PDK4Q16654 411 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HIST2H2ACQ16777 129 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PFKFB4Q16877 469 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PRTGQ2VWP7 1150 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 C18orf21Q32NC0 220 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TECRLQ5HYJ1 363 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CATSPEREQ5SY80 951 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PRMT9Q6P2P2 845 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PLD3Q8IV08 490 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KRT78Q8N1N4 520 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PLD6Q8N2A8 252 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FDCSPQ8NFU4 85 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TTLQ8NG68 377 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLC13A3Q8WWT9 602 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TM9SF4Q92544 642 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MRPL57Q9BQC6 102 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TMEM79Q9BSE2 394 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ROPN1BQ9BZX4 212 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ROPN1Q9HAT0 212 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MLXIPLQ9NP71 852 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 C5AR2Q9P296 337 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OPTCQ9UBM4 332 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DCDC2Q9UHG0 476 aa12.6□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SH2B3Q9UQQ2 575 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms