RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SMARCAL1Q9NZC9 954 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PTTG2Q9NZH5 202 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ANKMY1Q9P2S6 941 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 UBQLN2Q9UHD9 624 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MYO6Q9UM54 1294 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 FOXA2Q9Y261 457 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 PLEKHA6Q9Y2H5 1048 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 KIF3AQ9Y496 699 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CROCC2H7BZ55 1655 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZMYM4Q5VZL5 1548 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ROCK2O75116 1388 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 KTN1Q86UP2 1357 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 USP47Q96K76 1375 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 KIF15Q9NS87 1388 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 IGKV2D-30A0A075B6S6 120 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 A0A087X0K7 114 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 A0A0G2JPF8 293 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 C17orf105B2RV13 164 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GPR89AB7ZAQ6 455 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 HNRNPCL3B7ZW38 293 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCL24O00175 119 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PMS2P2O95744 297 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 AK1P00568 194 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GPR89BP0CG08 455 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 HNRNPCL4P0DMR1 293 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SKILP12757 684 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 PBLDP30039 288 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCND2P30279 289 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ARRB2P32121 409 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SEC61A1P61619 476 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 EEF1A1P68104 462 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 PMP22Q01453 160 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MBTD1Q05BQ5 628 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 LCP2Q13094 533 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 NFATC4Q14934 902 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 STXBP2Q15833 593 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DUOXA1Q1HG43 343 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ITPRIPL2Q3MIP1 535 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 EPC2Q52LR7 807 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TEX35Q5T0J7 233 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCNYL2Q5T2Q4 361 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 EEF1A1P5Q5VTE0 462 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 LYSMD4Q5XG99 296 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZNF770Q6IQ21 691 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 WDR88Q6ZMY6 472 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MACC1Q6ZN28 852 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SYVN1Q86TM6 617 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SATL1Q86VE3 508 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 LAX1Q8IWV1 398 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.74□□□□□ -1.97
HPS3-203ENST00000460822 LMNTD1Q8N9Z9 388 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZNF114Q8NC26 417 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 NOA1Q8NC60 698 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 TMEM185AQ8NFB2 350 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ASB5Q8WWX0 329 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TSACCQ96A04 125 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 RFT1Q96AA3 541 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ABHD8Q96I13 439 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 THUMPD2Q9BTF0 503 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 TRMT61BQ9BVS5 477 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 CCSER1Q9C0I3 900 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DDX47Q9H0S4 455 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 NAPBQ9H115 298 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 RIMS4Q9H426 269 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 PELI2Q9HAT8 420 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 MAGEF1Q9HAY2 307 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 A4GALTQ9NPC4 353 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 FANCFQ9NPI8 374 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 GPR173Q9NS66 373 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 FAM212BQ9NTI7 297 aaPredicted RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 ZCCHC3Q9NUD5 404 aaKnown RBP2.74□□□□□ -1.97
HPS3-203ENST00000460822 SPHK1Q9NYA1 384 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DONSONQ9NYP3 566 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 WWOXQ9NZC7 414 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TMOD2Q9NZR1 351 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 KCNN3Q9UGI6 736 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 TSPAN16Q9UKR8 245 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 VDAC3Q9Y277 283 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 DLGAP4Q9Y2H0 992 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ANGPTL3Q9Y5C1 460 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 ABCA10Q8WWZ4 1543 aa2.74□□□□□ -1.97
HPS3-203ENST00000460822 RALGAPBQ86X10 1494 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 BLMP54132 1417 aaPredicted RBP2.73□□□□□ -1.97
HPS3-203ENST00000460822 ZNF608Q9ULD9 1512 aaPredicted RBP2.73□□□□□ -1.97
HPS3-203ENST00000460822 TRAV18A0A075B6X5 111 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 MAGEB16A2A368 324 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 TMEM150CB9EJG8 249 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 ZNF587BE7ETH6 402 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 H0YCG3 227 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 MAGEB2O15479 319 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 PDE9AO76083 593 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 OPN1MWP04001 364 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 OPN1MW2P0DN77 364 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 OPN1MW3P0DN78 364 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 PDHBP11177 359 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 PRG2P13727 222 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 GOT1P17174 413 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 NR1D1P20393 614 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 VAMP7P51809 220 aa2.73□□□□□ -1.97
HPS3-203ENST00000460822 HNRNPFP52597 415 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms