RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 RAI2Q9Y5P3 530 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 MRPL42Q9Y6G3 142 aaKnown RBP6.01□□□□□ -1.45
VPS13D-202ENST00000460333 MGAMO43451 1857 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 WWP2O00308 870 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 FPGTO14772 594 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 PER2O15055 1255 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SULT1B1O43704 296 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 RFPL3O75679 317 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 UGT2B17O75795 530 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 STC2O76061 302 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SERPINA3P01011 423 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 M6PRP20645 277 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 GCAP28676 217 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 NOS3P29474 1203 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 CCR10P46092 362 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 PGDP52209 483 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 IRF9Q00978 393 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 MXD1Q05195 221 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 PRKCDQ05655 676 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SLC13A2Q13183 592 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 KCNAB2Q13303 367 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SGCGQ13326 291 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SLC36A3Q495N2 470 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 UBE2UQ5VVX9 321 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SCIMPQ6UWF3 145 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 USP45Q70EL2 814 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 TAS1R1Q7RTX1 841 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 LHFPL3Q86UP9 236 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 GALNT11Q8NCW6 608 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF675Q8TD23 568 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 NACC2Q96BF6 587 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 SPACA7Q96KW9 195 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 IFT27Q9BW83 186 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 GKN1Q9NS71 199 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 DZANK1Q9NVP4 752 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 RPS6KB2Q9UBS0 482 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 ASB4Q9Y574 426 aa6.01□□□□□ -1.45
VPS13D-202ENST00000460333 IGLV3-10A0A075B6K4 115 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 A0A1B0GVI7 797 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 A8MT66 165 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 A8MV72 311 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 PDCD5O14737 125 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KIAA0355O15063 1070 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ABLIM3O94929 683 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ARHGEF15O94989 841 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 FUCA1P04066 466 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RB1P06400 928 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SPATA31D3P0C874 917 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CYP2A6P11509 494 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 BMP1P13497 986 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 NUDT1P36639 197 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ACVRL1P37023 503 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SRSF11Q05519 484 aaKnown RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 ZDHHC20Q5W0Z9 365 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KANK2Q63ZY3 851 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF613Q6PF04 617 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KIAA1324Q6UXG2 1013 aaKnown RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 BAIAP2L2Q6UXY1 529 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TPGS1Q6ZTW0 290 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SPATA31D4Q6ZUB0 917 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 GALNT7Q86SF2 657 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 OR10G2Q8NGC3 310 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RHOXF1Q8NHV9 184 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 MRGPRX2Q96LB1 330 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 NECTIN4Q96NY8 510 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PSKH2Q96QS6 385 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CHMP1AQ9HD42 196 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 ARL15Q9NXU5 204 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ACSL5Q9ULC5 683 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 STUB1Q9UNE7 303 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PCDHB1Q9Y5F3 818 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TCRBV3S1A0A5B6 114 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SDHDO14521 159 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZBTB14O43829 449 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 GJB5O95377 273 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RLN1P04808 185 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZDHHC11BP0C7U3 371 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 JUNBP17275 347 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 EN2P19622 333 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 NPR2P20594 1047 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KCNA5P22460 613 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 S100A2P29034 98 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 IRF8Q02556 426 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TGM3Q08188 693 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PTPRNQ16849 979 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 DCST1Q5T197 706 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KCTD11Q693B1 232 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 EIF5AL1Q6IS14 154 aaKnown RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 CERS6Q6ZMG9 384 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 GDPGP1Q6ZNW5 385 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CHMP1BQ7LBR1 199 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 BHLHA9Q7RTU4 235 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TP53INP2Q8IXH6 220 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 HS6ST3Q8IZP7 471 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CHCHD4Q8N4Q1 142 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 DCAF4L2Q8NA75 395 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 OR5T2Q8NGG2 359 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 LINGO1Q96FE5 620 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 MYO19Q96H55 970 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZSWIM3Q96MP5 696 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms