RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LINC00299Q6ZSB3 139 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 CEP97Q8IW35 865 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 TERB2Q8NHR7 220 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
UFD1-205ENST00000459854 BIRC7Q96CA5 298 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 CORO1BQ9BR76 489 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 ASPNQ9BXN1 380 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 LIN28AQ9H9Z2 209 aaKnown RBP9.48□□□□□ -0.89
UFD1-205ENST00000459854 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 ZFP57Q9NU63 452 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 KCNN3Q9UGI6 736 aa9.48□□□□□ -0.89
UFD1-205ENST00000459854 LRATO95237 230 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 NDST3O95803 873 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 EIF2DP41214 584 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 TMEM240Q5SV17 173 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 UBXN11Q5T124 520 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 TSTD2Q5T7W7 516 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.47□□□□□ -0.89
UFD1-205ENST00000459854 FAM156AQ8NDB6 213 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 OR10H4Q8NGA5 316 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 ZNF675Q8TD23 568 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 KCNN1Q92952 543 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 C7orf50Q9BRJ6 194 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 FUNDC2Q9BWH2 189 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 LYARQ9NX58 379 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 MALT1Q9UDY8 824 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 KRBA1A5PL33 1030 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 AGAP5A6NIR3 686 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 HSPA12AO43301 675 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 C4BPAP04003 597 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 CREB1P16220 341 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 HTR1EP28566 365 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 BRCC3P46736 316 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 RAB5CP51148 216 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CDH8P55286 799 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 SSTP61278 116 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 RASGEF1BQ0VAM2 473 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 FGL2Q14314 439 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 ABCA11PQ4W5N1 156 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 AADACL4Q5VUY2 407 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 SNX20Q7Z614 316 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 MRPL45Q9BRJ2 306 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 AARSD1Q9BTE6 412 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 TNKS2Q9H2K2 1166 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 MARCH2Q9P0N8 246 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 TCHHQ07283 1943 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 TCRBV7S2A1N4TA0A589 114 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GLUD1P00367 558 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GIMD1P0DJR0 217 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 LHCGRP22888 699 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 SCNN1AP37088 669 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 LILRA4P59901 499 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 MPP7Q5T2T1 576 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GPR158Q5T848 1215 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 LRRC66Q68CR7 880 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CLEC6AQ6EIG7 209 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 MED27Q6P2C8 311 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 SLC36A4Q6YBV0 504 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 HSDL2Q6YN16 418 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CCDC71Q8IV32 467 aaPredicted RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 OR13J1Q8NGT2 312 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 RIOK2Q9BVS4 552 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 CDADC1Q9BWV3 514 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 ZNF436Q9C0F3 470 aaPredicted RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 HSD3B7Q9H2F3 369 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 MAT2BQ9NZL9 334 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 FNIP2Q9P278 1114 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PPIEQ9UNP9 301 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 OR10H1Q9Y4A9 318 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 A0A1B0GVM2 712 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 NAP1L6A6NFF2 107 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GTPBP1O00178 669 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 BMP2P12643 396 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GADD45AP24522 165 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PRKCHP24723 683 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CD6P30203 668 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 ABL2P42684 1182 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PTGER3P43115 390 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CRISP3P54108 245 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 TXNL4AP83876 142 aaKnown RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 RAPSNQ13702 412 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GXYLT1Q4G148 440 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PLPP4Q5VZY2 271 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 PSD4Q8NDX1 1056 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GPR156Q8NFN8 814 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 OR8K5Q8NH50 307 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 GATAD2BQ8WXI9 593 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 CPNE2Q96FN4 548 aaPredicted RBP9.47□□□□□ -0.89
UFD1-205ENST00000459854 VMP1Q96GC9 406 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 NT5DC2Q9H857 520 aa9.47□□□□□ -0.89
UFD1-205ENST00000459854 TAS2R8Q9NYW2 309 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms