RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 KCNE2Q9Y6J6 123 aa9.48□□□□□ -0.89
HDLBP-228ENST00000459788 TRAV17A0A0B4J275 112 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 FAM95CA0A1B0GW59 222 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 CCDC189A1A4V9 331 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 DYTNA2CJ06 578 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 TCP11X1B4DZS4 312 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 BANF1O75531 89 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 C8orf89P0DMQ9 161 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 CDH1P12830 882 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 HPDP32754 393 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-228ENST00000459788 RPL21P46778 160 aaKnown RBP9.47□□□□□ -0.89
HDLBP-228ENST00000459788 RGS1Q08116 209 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 Q0VFX4 171 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 RAPSNQ13702 412 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
HDLBP-228ENST00000459788 CSHL1Q14406 222 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 KCTD19Q17RG1 926 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-228ENST00000459788 PLAG1Q6DJT9 500 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 SHISA6Q6ZSJ9 500 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 CUZD1Q86UP6 607 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 LAPTM4BQ86VI4 370 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 LGI4Q8N135 537 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 TCAIMQ8N3R3 496 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ST6GALNAC3Q8NDV1 305 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 TTLQ8NG68 377 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 OR51Q1Q8NH59 317 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 NT5CQ8TCD5 201 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 PYROXD1Q8WU10 500 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 SLC5A11Q8WWX8 675 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 PSMF1Q92530 271 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 KRT12Q99456 494 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 OLFM1Q99784 485 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 AIF1LQ9BQI0 150 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 TRIM51Q9BSJ1 452 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 YIPF2Q9BWQ6 316 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 DERL2Q9GZP9 239 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ATG10Q9H0Y0 220 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ZNF160Q9HCG1 818 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ASF1BQ9NVP2 202 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 COPG2Q9UBF2 871 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 ZFP69BQ9UJL9 534 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 MRPS2Q9Y399 296 aaKnown RBP9.47□□□□□ -0.89
HDLBP-228ENST00000459788 DYRK1BQ9Y463 629 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 OARD1Q9Y530 152 aa9.47□□□□□ -0.89
HDLBP-228ENST00000459788 GTF3C1Q12789 2109 aa9.46□□□□□ -0.89
HDLBP-228ENST00000459788 WIPF3A6NGB9 483 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 LCMT2O60294 686 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 WFS1O76024 890 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 AGFG2O95081 481 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 EDN3P14138 238 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 JAK1P23458 1154 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 GGT5P36269 586 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 XCR1P46094 333 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 SCTRP47872 440 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 TNFSF10P50591 281 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 SLC12A2P55011 1212 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 FOXL2P58012 376 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ATP6V0D1P61421 351 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 NAB1Q13506 487 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 EXT1Q16394 746 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ZXDCQ2QGD7 858 aaPredicted RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 H3F3CQ6NXT2 135 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ABHD13Q7L211 337 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ZNF572Q7Z3I7 529 aaPredicted RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 CPEB2Q7Z5Q1 589 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 PLD3Q8IV08 490 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ZBED8Q8IZ13 594 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 CISD2Q8N5K1 135 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 C7orf57Q8NEG2 295 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 SPATA4Q8NEY3 305 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 OR9A4Q8NGU2 314 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 DNAJB8Q8NHS0 232 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 CYTH2Q99418 400 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 CPNE1Q99829 537 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 VN1R1Q9GZP7 353 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 EHD1Q9H4M9 534 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 NT5DC2Q9H857 520 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 CNOT10Q9H9A5 744 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ZBTB20Q9HC78 741 aaPredicted RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 LRRC4CQ9HCJ2 640 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 ABCF3Q9NUQ8 709 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 GPRC5BQ9NZH0 403 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 TXNDC16Q9P2K2 825 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 UTP11Q9Y3A2 253 aaKnown RBP9.46□□□□□ -0.9
HDLBP-228ENST00000459788 PSAT1Q9Y617 370 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.9
HDLBP-228ENST00000459788 NBPF19A0A087WUL8 3843 aa9.45□□□□□ -0.9
HDLBP-228ENST00000459788 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
HDLBP-228ENST00000459788 MAGEB17A8MXT2 336 aa9.45□□□□□ -0.9
HDLBP-228ENST00000459788 OR1F1O43749 312 aa9.45□□□□□ -0.9
HDLBP-228ENST00000459788 GALR3O60755 368 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms