RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 DUOXA1Q1HG43 343 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 AASDHQ4L235 1098 aaPredicted RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 THEMIS2Q5TEJ8 643 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 CRLF3Q8IUI8 442 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 TRIM48Q8IWZ4 208 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 ARL14Q8N4G2 192 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 KYQ8NBH2 561 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 FBXO15Q8NCQ5 510 aaPredicted RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 OR10G6Q8NH81 332 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 AGAP11Q8TF27 550 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 ZNF473Q8WTR7 871 aaKnown RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 UBTD2Q8WUN7 234 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 LCN9Q8WX39 176 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NEIL2Q969S2 332 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 C7orf26Q96N11 449 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 DEPDC7Q96QD5 511 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 GPATCH1Q9BRR8 931 aaKnown RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 C1QTNF3Q9BXJ4 246 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 NUF2Q9BZD4 464 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 KLHL25Q9H0H3 589 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 SPNS1Q9H2V7 528 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 SLC32A1Q9H598 525 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 WDR55Q9H6Y2 383 aaPredicted RBP9.94□□□□□ -0.82
USP39-210ENST00000459775 TAC3Q9UHF0 121 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 CLEC4AQ9UMR7 237 aa9.94□□□□□ -0.82
USP39-210ENST00000459775 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 ADAMTS9Q9P2N4 1935 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 GOLGA8QA0A0J9YX86 632 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 A0A1B0GVC2 190 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ATP6AP2A0A1C7CYW4 349 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 GOLGA8OA6NCC3 632 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 GOLGA8NF8WBI6 632 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ZNF195O14628 629 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 PRAMEF10O60809 474 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ATP6AP2O75787 350 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ANXA6P08133 673 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ALAS2P22557 587 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 HNMTP50135 292 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 HTR6P50406 440 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 RPL14P50914 215 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 ARHGDIBP52566 201 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 UBE2IP63279 158 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 IL1RL1Q01638 556 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 HHEXQ03014 270 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 TRAF3Q13114 568 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 SF3A2Q15428 464 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 BCL2A1Q16548 175 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 SGO1Q5FBB7 561 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 GKN2Q86XP6 184 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 ZNF740Q8NDX6 193 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 RAB3IL1Q8TBN0 382 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 BARD1Q99728 777 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 KIR3DX1Q9H7L2 352 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 SDHAF3Q9NRP4 125 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 DNAJC11Q9NVH1 559 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 SUSD2Q9UGT4 822 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 TMEM5Q9Y2B1 443 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 RAP2CQ9Y3L5 183 aa9.93□□□□□ -0.82
USP39-210ENST00000459775 TNPO3Q9Y5L0 923 aaKnown RBP9.93□□□□□ -0.82
USP39-210ENST00000459775 OR6C74A6NCV1 312 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 OR5K4A6NMS3 321 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 SH3BGRLO75368 114 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 FAM107AO95990 144 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 STATHP02808 62 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 CAPN1P07384 714 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 HPGDP15428 266 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 ATF4P18848 351 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 XRCC1P18887 633 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 PKLRP30613 574 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 MAPK9P45984 424 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 ARRB1P49407 418 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 RAB28P51157 221 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 CCNG1P51959 295 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 CLNS1AP54105 237 aaKnown RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 AQP5P55064 265 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 ASPHQ12797 758 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 DYNC1I2Q13409 638 aaKnown RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 PIN1Q13526 163 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 CPSF6Q16630 551 aaKnown RBP eCLIP9.92□□□□□ -0.82
USP39-210ENST00000459775 UGT3A2Q3SY77 523 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 SLC9B1Q4ZJI4 515 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 TMTC4Q5T4D3 741 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 NKAIN2Q5VXU1 208 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 OR7E24Q6IFN5 339 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 TUBA3EQ6PEY2 450 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 FOXR1Q6PIV2 292 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 CCDC121Q6ZUS5 278 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 GPRIN3Q6ZVF9 776 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 AMIGO1Q86WK6 493 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 PLD3Q8IV08 490 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 SLC35F3Q8IY50 421 aa9.92□□□□□ -0.82
USP39-210ENST00000459775 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 PIWIL2Q8TC59 973 aaKnown RBP9.92□□□□□ -0.82
USP39-210ENST00000459775 C3orf30Q96M34 536 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms