RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AVPP01185 164 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 VIPP01282 170 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CDH1P12830 882 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DDX5P17844 614 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 CMPK1P30085 196 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ASMTP46597 345 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 POLR2JP52435 117 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 C21orf59P57076 290 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 KCNJ2P63252 427 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 FOXM1Q08050 763 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DDX39BQ13838 428 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 RCAN2Q14206 197 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 FZD2Q14332 565 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CLCA4Q14CN2 919 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 PLCL1Q15111 1095 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 TEAD4Q15561 434 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DPY19L1Q2PZI1 675 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ZXDCQ2QGD7 858 aaPredicted RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 IL23RQ5VWK5 629 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ICE2Q659A1 982 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 REP15Q6BDI9 236 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DUS1LQ6P1R4 473 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 SLC23A3Q6PIS1 610 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CYP20A1Q6UW02 462 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SUSD1Q6UWL2 747 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 TMIGD1Q6UXZ0 262 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 GK5Q6ZS86 529 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ARPINQ7Z6K5 226 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 TAF8Q7Z7C8 310 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 GKN2Q86XP6 184 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SCUBE1Q8IWY4 988 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 LAS2Q8IYD9 372 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 PGAM4Q8N0Y7 254 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SLC22A18ASQ8N1D0 253 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ABHD11Q8NFV4 315 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 OR7G3Q8NG95 312 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 OR52E1Q8NGJ3 308 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DNAJB8Q8NHS0 232 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 LCN9Q8WX39 176 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 RCN3Q96D15 328 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SPDL1Q96EA4 605 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 HSPA12BQ96MM6 686 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SLC6A18Q96N87 628 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 IL17FQ96PD4 163 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 C1orf50Q9BV19 199 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CADM1Q9BY67 442 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 DPY30Q9C005 99 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 EBF2Q9HAK2 575 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SLC40A1Q9NP59 571 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 AHSPQ9NZD4 102 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SPASTQ9UBP0 616 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DKK4Q9UBT3 224 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 TBC1D29Q9UFV1 150 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 APOBEC3BQ9UH17 382 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 CIDEBQ9UHD4 219 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 TAC3Q9UHF0 121 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 LEF1Q9UJU2 399 aaPredicted RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 PLAGL1Q9UM63 463 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 CCL27Q9Y4X3 112 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 ZNF462Q96JM2 2506 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 PCDH15Q96QU1 1955 aa8.6□□□□□ -1.03
VPS50-207ENST00000458530 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 MDC1Q14676 2089 aaKnown RBP8.6□□□□□ -1.03
VPS50-207ENST00000458530 SPAARA0A1B0GVQ0 90 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 ANKDD1BA6NHY2 528 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 CCDC154A6NI56 674 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 OR52A4PA6NMU1 304 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 TLR4O00206 839 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 STAMBPO95630 424 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 NPPAP01160 153 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 IL6P05231 212 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 NME1P15531 152 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 XRCC1P18887 633 aaPredicted RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 AK4P27144 223 aaPredicted RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 HOXD12P35452 270 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 DPP6P42658 865 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 RAP1GDS1P52306 607 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 DIO3P55073 304 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 HNRNPKP61978 463 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS50-207ENST00000458530 SIM1P81133 766 aaPredicted RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 REEP5Q00765 189 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 HMGCS1Q01581 520 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 PRDX1Q06830 199 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 TBL3Q12788 808 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 EIF2B5Q13144 721 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 KIR2DS3Q14952 304 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 ZNF423Q2M1K9 1284 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 COL28A1Q2UY09 1125 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 TRMT5Q32P41 509 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 SPATS1Q496A3 300 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 WASHC2DQ5SRD0 308 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 TPRG1LQ5T0D9 272 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 PAOXQ6QHF9 649 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 BNC2Q6ZN30 1099 aaPredicted RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 SLC9B2Q86UD5 537 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms