RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TCF25Q9BQ70 676 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 BRD9Q9H8M2 597 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 SGK2Q9HBY8 427 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 ABCB8Q9NUT2 735 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 CTSKP43235 329 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 MEF2AQ02078 507 aaPredicted RBP18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 MED22Q15528 200 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 PLEKHG6Q3KR16 790 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 CPTPQ5TA50 214 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 LRRC70Q7Z2Q7 622 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 SLC12A9Q9BXP2 914 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 GABARAPL1Q9H0R8 117 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 CFAP97Q9P2B7 532 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 B4GALT6Q9UBX8 382 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 MAP4K5Q9Y4K4 846 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 FRMPD3Q5JV73 1810 aa18.88■□□□□ 0.61
CNEP1R1-203ENST00000458059 SNPHO15079 494 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 GPX2P18283 190 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 PCYT1AP49585 367 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 ITGA1P56199 1179 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 GPR33Q49SQ1 333 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 TPRG1LQ5T0D9 272 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 OR10G2Q8NGC3 310 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 OR4A15Q8NGL6 344 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 CAPSLQ8WWF8 208 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 C7orf34Q96L11 122 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 MTG2Q9H4K7 406 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 AP3M1Q9Y2T2 418 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 NRG2O14511 850 aaPredicted RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 DNAJB5O75953 348 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 KCNK2O95069 426 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 CHRM5P08912 532 aaPredicted RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 HLA-EP13747 358 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 ELAVL2Q12926 359 aaKnown RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 MTA1Q13330 715 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 SF3B4Q15427 424 aaKnown RBP eCLIP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 SLC8B1Q6J4K2 584 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 Q6ZVU0 165 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 FAM217AQ8IXS0 508 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 OR2AP1Q8NGE2 309 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 ZNF232Q9UNY5 417 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 MGAT4DA6NG13 374 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 RFPL2O75678 378 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 UPK1BO75841 260 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 VEPH1Q14D04 833 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 EXOC3L2Q2M3D2 409 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 ATAD3BQ5T9A4 648 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 DESI1Q6ICB0 168 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 DPY19L3Q6ZPD9 716 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 OTOP2Q7RTS6 562 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 TSEN54Q7Z6J9 526 aaKnown RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 NPAS4Q8IUM7 802 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 ZNF675Q8TD23 568 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 CSGALNACT1Q8TDX6 532 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 CIDECQ96AQ7 238 aaPredicted RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 YIPF2Q9BWQ6 316 aa18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 EXOSC4Q9NPD3 245 aaKnown RBP18.87■□□□□ 0.61
CNEP1R1-203ENST00000458059 XIRP2A4UGR9 3374 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 DSCR3O14972 297 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ALOX5P09917 674 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 SLC6A12P48065 614 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ST3GAL4Q11206 333 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 SMU1Q2TAY7 513 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ARMCX4Q5H9R4 360 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 THOC6Q86W42 341 aaKnown RBP18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 LGI4Q8N135 537 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ZNF461Q8TAF7 563 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 CCNB1IP1Q9NPC3 277 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ADPRHL2Q9NX46 363 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 IMPAD1Q9NX62 359 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 PCDHB11Q9Y5F2 797 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 DNAH14Q0VDD8 3507 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 CYP2A7P20853 494 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 Q6ZVL8 140 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 CELF2-AS1Q8N7Q2 184 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 OR5M11Q96RB7 305 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 ERVK13-1Q9NX77 482 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 NDUFAF4Q9P032 175 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 DUSP12Q9UNI6 340 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 LYVE1Q9Y5Y7 322 aa18.86■□□□□ 0.61
CNEP1R1-203ENST00000458059 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 GCM2O75603 506 aaPredicted RBP18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 C1SP09871 688 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 JUPP14923 745 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 FEN1P39748 380 aaKnown RBP18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 TRPC1P48995 793 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 CXCR4P61073 352 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 RGNQ15493 299 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 ZNF385BQ569K4 471 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 ZNF366Q8N895 744 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 NFKBIDQ8NI38 313 aa18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.85■□□□□ 0.61
CNEP1R1-203ENST00000458059 A8MV72 311 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms