RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IL23AQ9NPF7 189 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 KLHL1Q9NR64 748 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TUBG2Q9NRH3 451 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 RMND1Q9NWS8 449 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 ZDHHC7Q9NXF8 308 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CLEC5AQ9NY25 188 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 STMN3Q9NZ72 180 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 CTTNBP2NLQ9P2B4 639 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 NCDNQ9UBB6 729 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 FAF1Q9UNN5 650 aaPredicted RBP5.23□□□□□ -1.57
VPS41-209ENST00000457055 C5P01031 1676 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 TOGARAM1Q9Y4F4 1720 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 UTYO14607 1347 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 UBN2Q6ZU65 1347 aa5.23□□□□□ -1.57
VPS41-209ENST00000457055 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 A0A1B0GVG6 124 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 A0A1W2PPV4 95 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 KANSL1LA0AUZ9 987 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 MTMR11A4FU01 709 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TMEM191CA6NGB0 347 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 CLCA1A8K7I4 914 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 SNAP23O00161 211 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 STX16O14662 325 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 ITGB1BP1O14713 200 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 HSF2BPO75031 334 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 GPR32O75388 356 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DEXIO95424 95 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TNNC2P02585 160 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 APOC1P02654 83 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 IFNA6P05013 189 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 CHRM5P08912 532 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 PEPDP12955 493 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 MTHFD2P13995 350 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 NQO2P16083 231 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 NPPBP16860 134 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TNNI1P19237 187 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 FUT1P19526 365 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DDCP20711 480 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 HNF1AP20823 631 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 ATP6V1C1P21283 382 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 KCNA3P22001 575 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 EDNRBP24530 442 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 ACP1P24666 158 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 UCP1P25874 307 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PPP2R1AP30153 589 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 RYKP34925 604 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 NAA10P41227 235 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 ALDH3B2P48448 385 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PPP3CCP48454 512 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 HNRNPFP52597 415 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 PER3P56645 1201 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 B4GALNT1Q00973 533 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 GHRHRQ02643 423 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 CACNG1Q06432 222 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 SPOCK1Q08629 439 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 SMCO1Q147U7 214 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DRAP1Q14919 205 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 MFSD13AQ14CX5 517 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PON3Q15166 354 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PDK4Q16654 411 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 CA9Q16790 459 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TPD52L1Q16890 204 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 SLC5A12Q1EHB4 618 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 BTBD16Q32M84 506 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 GAGE13Q4V321 117 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS41-209ENST00000457055 SEL1L2Q5TEA6 688 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 MBNL2Q5VZF2 373 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 MFSD14CQ5VZR4 134 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PLCXD3Q63HM9 321 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 TTI2Q6NXR4 508 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TMEM71Q6P5X7 295 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TMIGD1Q6UXZ0 262 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 WDR88Q6ZMY6 472 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 C15orf39Q6ZRI6 1047 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 OTOP1Q7RTM1 612 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 SMIM15Q7Z3B0 74 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 ADAMTSL2Q86TH1 951 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 LHFPL3Q86UP9 236 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 PPP1R3BQ86XI6 285 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 GID4Q8IVV7 300 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DHX40Q8IX18 779 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 UNC5BQ8IZJ1 945 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 LRRC17Q8N6Y2 441 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 IL17RCQ8NAC3 791 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 RDM1Q8NG50 284 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 SUN3Q8TAQ9 357 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 BRIX1Q8TDN6 353 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 TRIB2Q92519 343 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 MRGPRFQ96AM1 343 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DYDC2Q96IM9 177 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DNAJC1Q96KC8 554 aaKnown RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 B3GALT6Q96L58 329 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 TAAR1Q96RJ0 339 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 FIZ1Q96SL8 496 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 APOL2Q9BQE5 337 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 DGCR6LQ9BY27 220 aa5.22□□□□□ -1.57
VPS41-209ENST00000457055 OPN3Q9H1Y3 402 aaPredicted RBP5.22□□□□□ -1.57
VPS41-209ENST00000457055 RIOX1Q9H6W3 641 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms