RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 NPIPA1Q9UND3 350 aa11.68□□□□□ -0.54
TRA2B-206ENST00000456380 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-206ENST00000456380 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.545e-6■□□□□ 10.2
TRA2B-206ENST00000456380 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 ZBTB14O43829 449 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 NEURL1O76050 574 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 MPC1LP0DKB6 136 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TPSB2P20231 275 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 RPS15AP62244 130 aaKnown RBP11.67□□□□□ -0.54
TRA2B-206ENST00000456380 CSNK1G2P78368 415 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 CDK16Q00536 496 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TESK1Q15569 626 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TPSAB1Q15661 275 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 EXT1Q16394 746 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TTLL9Q3SXZ7 439 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 GSTA5Q7RTV2 222 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 GALNTL5Q7Z4T8 443 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 CHERPQ8IWX8 916 aaKnown RBP11.67□□□□□ -0.54
TRA2B-206ENST00000456380 KCT2Q8NC54 265 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 MCOLN3Q8TDD5 553 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TM4SF19Q96DZ7 209 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 KLHL42Q9P2K6 505 aa11.67□□□□□ -0.54
TRA2B-206ENST00000456380 FEZF1A0PJY2 475 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 GABRR3A8MPY1 467 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 ASNA1O43681 348 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 KIF5CO60282 957 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 LCMT2O60294 686 aaKnown RBP11.66□□□□□ -0.54
TRA2B-206ENST00000456380 MLYCDO95822 493 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 SP1P08047 785 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 CD46P15529 392 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 HRH2P25021 359 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-206ENST00000456380 TERF1P54274 439 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 RHAGQ02094 409 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 ABRAXAS2Q15018 415 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 NSDHLQ15738 373 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 MEI1Q5TIA1 1274 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 ZNF470Q6ECI4 717 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 PAPD4Q6PIY7 484 aaKnown RBP11.66□□□□□ -0.54
TRA2B-206ENST00000456380 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-206ENST00000456380 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 TMEM178AQ8NBL3 297 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 PLPP5Q8NEB5 264 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 ZCCHC10Q8TBK6 192 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 KCNJ9Q92806 393 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 GPAMQ9HCL2 828 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 FBXO6Q9NRD1 293 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-206ENST00000456380 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 SH2B3Q9UQQ2 575 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 DHRS7Q9Y394 339 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 SCN3AQ9NY46 2000 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 GTF3C1Q12789 2109 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
TRA2B-206ENST00000456380 CTAGE9A4FU28 777 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 ADAM10O14672 748 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 RDH16O75452 317 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 ENO3P13929 434 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 PAMP19021 973 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 TBPL1P62380 186 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 HSF1Q00613 529 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 OC90Q02509 493 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 ACTN3Q08043 901 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CTBP1Q13363 440 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 RNFT1Q5M7Z0 435 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 ZNF468Q5VIY5 522 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 SLC25A25Q6KCM7 469 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CASC4Q6P4E1 433 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 UBE2R2Q712K3 238 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 PIWIL4Q7Z3Z4 852 aaKnown RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 SLC26A11Q86WA9 606 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 DOLPP1Q86YN1 238 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 SLC5A8Q8N695 610 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CAMKVQ8NCB2 501 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CD200R1Q8TD46 325 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 AGAP11Q8TF27 550 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 TSLPQ969D9 159 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 C14orf79Q96F83 325 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 PEX11GQ96HA9 241 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 GPR21Q99679 349 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 RBCK1Q9BYM8 510 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CDCP1Q9H5V8 836 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 ANKHQ9HCJ1 492 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 CCDC177Q9NQR7 707 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-206ENST00000456380 LRFN1Q9P244 771 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 GUCA1BQ9UMX6 200 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 NAALAD2Q9Y3Q0 740 aa11.65□□□□□ -0.54
TRA2B-206ENST00000456380 DNAJB6O75190 326 aa11.65□□□□□ -0.55
TRA2B-206ENST00000456380 SLC26A5P58743 744 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms