RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC35G6P0C7Q6 338 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 NCF1P14598 390 aaPredicted RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 GNAZP19086 355 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 AHRP35869 848 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 SCTRP47872 440 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 CCL11P51671 97 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 CDC16Q13042 620 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 ATP1A4Q13733 1029 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 FAM83EQ2M2I3 478 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 C18orf21Q32NC0 220 aaPredicted RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 MED25Q71SY5 747 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 TMPRSS11BQ86T26 416 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 AMER3Q8N944 861 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 TMEM102Q8N9M5 508 aaPredicted RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 RHEBL1Q8TAI7 183 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 SLC13A3Q8WWT9 602 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 COL26A1Q96A83 441 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 CAPS2Q9BXY5 557 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 SPNS1Q9H2V7 528 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 CD274Q9NZQ7 290 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 PTBP2Q9UKA9 531 aaKnown RBP16.47■□□□□ 0.23
USP39-208ENST00000455732 MAP4K5Q9Y4K4 846 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 FLNCQ14315 2725 aa16.47■□□□□ 0.23
USP39-208ENST00000455732 A0A096LPK6 155 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 H0YIG0 161 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 RIPK2O43353 540 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 OR1F1O43749 312 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 KRT38O76015 456 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 NSA2O95478 260 aaKnown RBP16.46■□□□□ 0.23
USP39-208ENST00000455732 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 MMP11P24347 488 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 TYK2P29597 1187 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 OTX2P32243 289 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 CASRP41180 1078 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 GDF5P43026 501 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 MSH2P43246 934 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 KCNC1P48547 511 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 RRADP55042 308 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 IRF9Q00978 393 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 MEF2AQ02078 507 aaPredicted RBP16.46■□□□□ 0.23
USP39-208ENST00000455732 OCA2Q04671 838 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 PWP1Q13610 501 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 ATG9BQ674R7 924 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 SLCO4C1Q6ZQN7 724 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 ASB18Q6ZVZ8 466 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 PPP1R32Q7Z5V6 425 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 ZNF740Q8NDX6 193 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 STT3BQ8TCJ2 826 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 UBTD2Q8WUN7 234 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 DCAKDQ8WVC6 231 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 KCTD4Q8WVF5 259 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 NXNL1Q96CM4 212 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 TGIF2Q9GZN2 237 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 EPN3Q9H201 632 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 EHD1Q9H4M9 534 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 MKKSQ9NPJ1 570 aaPredicted RBP16.46■□□□□ 0.23
USP39-208ENST00000455732 SEMA3GQ9NS98 782 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 C14orf105Q9NVL8 296 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 COPG2Q9UBF2 871 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 ZFP69BQ9UJL9 534 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 MRPS2Q9Y399 296 aaKnown RBP16.46■□□□□ 0.23
USP39-208ENST00000455732 SLC22A7Q9Y694 548 aa16.46■□□□□ 0.23
USP39-208ENST00000455732 SCN3AQ9NY46 2000 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 HECTD1Q9ULT8 2610 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 SYCE1LA8MT33 242 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 ZNF500O60304 480 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 STK16O75716 305 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 KLHL2O95198 593 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 STATHP02808 62 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 S100BP04271 92 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 ZGLP1P0C6A0 271 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 FAM153BP0C7A2 387 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 TNFRSF8P28908 595 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 AVPR1BP47901 424 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 SNRPNP63162 240 aaKnown RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 TLE1Q04724 770 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 KLRB1Q12918 225 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 ACAP2Q15057 778 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 FAM153CQ494X1 144 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 LRRC70Q7Z2Q7 622 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 ANKRD53Q8N9V6 530 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 NT5CQ8TCD5 201 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 MIEF2Q96C03 454 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 MMABQ96EY8 250 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 FER1L6-AS2Q96M78 137 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 GPR78Q96P69 363 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 PITHD1Q9GZP4 211 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 SOX17Q9H6I2 414 aaPredicted RBP16.45■□□□□ 0.22
USP39-208ENST00000455732 FETUBQ9UGM5 382 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 CNTRLQ7Z7A1 2325 aa16.45■□□□□ 0.22
USP39-208ENST00000455732 EXOC1LA0A1B0GW35 172 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 POC1B-GALNT4F8VUJ3 575 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 PEX12O00623 359 aa16.44■□□□□ 0.22
USP39-208ENST00000455732 NDUFS4O43181 175 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms