RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RAET1LQ5VY80 246 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 LYSMD4Q5XG99 296 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 HIST2H2BCQ6DN03 193 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 HIST2H2BDQ6DRA6 164 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ASPHD2Q6ICH7 369 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC25A25Q6KCM7 469 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM173BQ6P4H8 233 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRIM65Q6PJ69 517 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 KYAT3Q6YP21 454 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 TPGS1Q6ZTW0 290 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC16A9Q7RTY1 509 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 IGFN1Q86VF2 1251 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 LONP2Q86WA8 852 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 XYLT1Q86Y38 959 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CDKL3Q8IVW4 592 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM114A1Q8IWE2 563 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 STHQ8IWL8 128 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 LAX1Q8IWV1 398 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 FUKQ8N0W3 1084 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 THEM5Q8N1Q8 247 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 BOLLQ8N9W6 283 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR13F1Q8NGS4 319 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 GRHL3Q8TE85 626 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 GLYATL2Q8WU03 294 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 OSTF1Q92882 214 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 EMG1Q92979 244 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MOB3AQ96BX8 217 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CHMP6Q96FZ7 201 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SLC29A1Q99808 456 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ACBD6Q9BR61 282 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 HAUS8Q9BT25 410 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ROPN1BQ9BZX4 212 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 API5Q9BZZ5 524 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ROGDIQ9GZN7 287 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MFFQ9GZY8 342 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 MRPL47Q9HD33 250 aaKnown RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 SEMA5BQ9P283 1151 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CYTH4Q9UIA0 394 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 CCNL1Q9UK58 526 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 PCDHA7Q9UN72 937 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ICKQ9UPZ9 632 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 NCKAP1Q9Y2A7 1128 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZDHHC9Q9Y397 364 aa4.22□□□□□ -1.73
HMGB3P21-201ENST00000452483 A0A1W2PPV4 95 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TCRBV7S3A2A0A539 114 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ANKUB1A6NFN9 424 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 NEMP2A6NFY4 417 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CD8B2A6NJW9 211 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 FOXE1O00358 373 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SPRY2O43597 315 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PRAMEF2O60811 474 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PRAF2O60831 178 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SDC3O75056 442 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF217O75362 1048 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 BCAS1O75363 584 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CLN5O75503 358 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TM7SF2O76062 418 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MYO1DO94832 1006 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 UFL1O94874 794 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 HLA-DQA2P01906 255 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CAPN1P07384 714 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 LYNP07948 512 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SERPINF2P08697 491 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 DBTP11182 482 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 INSRRP14616 1297 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GNSP15586 552 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF10P21506 573 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 DGKAP23743 735 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 DPP4P27487 766 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 LCN1P31025 176 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 HOXA6P31267 233 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PRDX2P32119 198 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRIM23P36406 574 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PTGFRP43088 359 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ETV4P43268 484 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ANXA11P50995 505 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ARHGDIAP52565 204 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADPRHP54922 357 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 RGS8P57771 180 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 DAOAP59103 153 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 KRTAP10-2P60368 255 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TSPAN5P62079 268 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SKP1P63208 163 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TNNC1P63316 161 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDK3Q00526 305 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ENPEPQ07075 957 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TOP3AQ13472 1001 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRIP10Q15642 601 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 HKDC1Q2TB90 917 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CTU2Q2VPK5 515 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GAGE13Q4V321 117 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TEX44Q53QW1 395 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CMPK2Q5EBM0 449 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP6R3Q5H9R7 873 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 RABL3Q5HYI8 236 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms