RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 OLFM1Q99784 485 aa12.21□□□□□ -0.46
CHD3-206ENST00000452447 WDR83Q9BRX9 315 aaKnown RBP12.21□□□□□ -0.46
CHD3-206ENST00000452447 CENPEQ02224 2701 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 A0A1W2PQ72 361 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 SGK494L7N484 410 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 LCMT2O60294 686 aaKnown RBP12.2□□□□□ -0.46
CHD3-206ENST00000452447 BCL6P41182 706 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 TSFMP43897 325 aaKnown RBP12.2□□□□□ -0.46
CHD3-206ENST00000452447 XCR1P46094 333 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 FRG1Q14331 258 aaKnown RBP12.2□□□□□ -0.46
CHD3-206ENST00000452447 CSHL1Q14406 222 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 RIPOR1Q6ZS17 1223 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 SLC26A11Q86WA9 606 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 SIRT6Q8N6T7 355 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 MFSD9Q8NBP5 474 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 KCT2Q8NC54 265 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 ABHD11Q8NFV4 315 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 OR56A3Q8NH54 315 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 TM4SF19Q96DZ7 209 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 PDLIM5Q96HC4 596 aaKnown RBP12.2□□□□□ -0.46
CHD3-206ENST00000452447 VN1R1Q9GZP7 353 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 ZNF700Q9H0M5 742 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 HCN3Q9P1Z3 774 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 C19orf25Q9UFG5 118 aaPredicted RBP12.2□□□□□ -0.46
CHD3-206ENST00000452447 SNX24Q9Y343 169 aa12.2□□□□□ -0.46
CHD3-206ENST00000452447 LOC102723996A0A087X1L8 192 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 NDUFS4O43181 175 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 OR1F1O43749 312 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 JRKO75564 520 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 ZNF37AP17032 561 aaPredicted RBP12.19□□□□□ -0.46
CHD3-206ENST00000452447 MEF2AQ02078 507 aaPredicted RBP12.19□□□□□ -0.46
CHD3-206ENST00000452447 CALCOCO2Q13137 446 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 TMEM205Q6UW68 189 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 ZC3HC1Q86WB0 502 aaKnown RBP12.19□□□□□ -0.46
CHD3-206ENST00000452447 NKAPQ8N5F7 415 aaKnown RBP12.19□□□□□ -0.46
CHD3-206ENST00000452447 BBOF1Q8ND07 529 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 OR1N1Q8NGS0 311 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 PSMF1Q92530 271 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 FBXL8Q96CD0 374 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 VPS39Q96JC1 886 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 CYTH2Q99418 400 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
CHD3-206ENST00000452447 TUBB6Q9BUF5 446 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 NSMCE4AQ9NXX6 385 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 NTNG1Q9Y2I2 539 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 PSAT1Q9Y617 370 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 SLC22A7Q9Y694 548 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 MYO7BQ6PIF6 2116 aa12.19□□□□□ -0.46
CHD3-206ENST00000452447 FAM95CA0A1B0GW59 222 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TP73O15350 636 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 DDAH2O95865 285 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 SERPIND1P05546 499 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CYC1P08574 325 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 RPL21P46778 160 aaKnown RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 SLC12A2P55011 1212 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 SNRPNP63162 240 aaKnown RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 SKP1P63208 163 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 FASTKD3Q14CZ7 662 aaKnown RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 HERC3Q15034 1050 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 PCOLCEQ15113 449 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 SBSNQ6UWP8 590 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TMEM207Q6UWW9 146 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 ZBED8Q8IZ13 594 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CATSPER1Q8NEC5 780 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 OR4K1Q8NGD4 311 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 GRHL3Q8TE85 626 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 FAR1Q8WVX9 515 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 SLC5A11Q8WWX8 675 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 ANKRD7Q92527 254 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 MAGEB10Q96LZ2 347 aaPredicted RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 EGFL8Q99944 293 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHD3-206ENST00000452447 PLA2G3Q9NZ20 509 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 MOCS1Q9NZB8 636 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TEKT2Q9UIF3 430 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 NAALAD2Q9Y3Q0 740 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CPAMD8Q8IZJ3 1885 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CACNA1DQ01668 2161 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TRBC2A0A5B9 178 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 E7ESA3 106 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 RDH16O75452 317 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CELA2AP08217 269 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 SOX11P35716 441 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 AGTR2P50052 363 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 RGS1Q08116 209 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 PWP1Q13610 501 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 ZNF460Q14592 562 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CATSPEREQ5SY80 951 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 ABHD17BQ5VST6 288 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 RPUSD3Q6P087 351 aaKnown RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 FAM180AQ6UWF9 173 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CAPN12Q6ZSI9 719 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 LANCL3Q6ZV70 420 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 FRA10AC1Q70Z53 315 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 CPEB2Q7Z5Q1 589 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms