RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KIF25Q9UIL4 384 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF229Q9UJW7 825 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 CDC42EP3Q9UKI2 254 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 TLK1Q9UKI8 766 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 SARDHQ9UL12 918 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZDHHC8Q9ULC8 765 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 AGTPBP1Q9UPW5 1226 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 CRYL1Q9Y2S2 319 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 PPIL1Q9Y3C6 166 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 MTF2Q9Y483 593 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 U3KQ87 197 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 COL1A1P02452 1464 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 MAST2Q6P0Q8 1798 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 ATRNL1Q5VV63 1379 aa3.51□□□□□ -1.85
HMGB3P8-201ENST00000449709 BAZ2AQ9UIF9 1905 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 DENND4AQ7Z401 1863 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM237BA0A1B0GVD1 139 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A1W2PRG0 241 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM234BA2RU67 622 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TMEM210A6NLX4 147 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 A8MUA0 341 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 E7ESA3 106 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 H3BQ06 376 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 STMND1H3BQB6 276 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 I3L521 148 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PPP6CO00743 305 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GPR171O14626 319 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 DNALI1O14645 258 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OGTO15294 1046 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 INPPL1O15357 1258 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CLDN3O15551 220 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 IRAK2O43187 625 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PAPSS1O43252 624 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ARHGEF9O43307 516 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRKAB2O43741 272 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TSPAN2O60636 221 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HUS1O60921 280 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 LRCH4O75427 683 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MED24O75448 989 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR2B3O76000 313 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SORBS2O94875 1100 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GUCA1CO95843 209 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 C1QAP02745 245 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CD1AP06126 327 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 S100A9P06702 114 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 POLBP06746 335 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TPOP07202 933 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 KLK3P07288 261 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 KRT19P08727 400 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HTR1AP08908 422 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FGF2P09038 288 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CNPP09543 421 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 H2AFZP0C0S5 128 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SBK3P0C264 359 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNH1P13489 461 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 APEHP13798 732 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANXA8P13928 327 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 IL2RBP14784 551 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ATF2P15336 505 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MUC1P15941 1255 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ITGB8P26012 769 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 DDX6P26196 483 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PAX6P26367 422 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GIFP27352 417 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CALML3P27482 149 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 EEF1DP29692 281 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CALCRP30988 508 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC15A1P46059 708 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 RFX2P48378 723 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CCT3P49368 545 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ACOT2P49753 483 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 VEGFCP49767 419 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TKTL1P51854 596 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRELPP51888 382 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC7A2P52569 658 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ATP12AP54707 1039 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNASE9P60153 205 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ABCE1P61221 599 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PSME3P61289 254 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC7A9P82251 487 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 HSF2Q03933 536 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF33AQ06730 810 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FGL1Q08830 312 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TROAPQ12815 778 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MERTKQ12866 999 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 OVGP1Q12889 678 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CHAF1BQ13112 559 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRKG2Q13237 762 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CTBP1Q13363 440 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 NFYCQ13952 458 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 FLOT2Q14254 428 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 CAPRIN1Q14444 709 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 GRB7Q14451 532 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MXD4Q14582 209 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRAM2Q15035 370 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 PON3Q15166 354 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZMYND11Q15326 602 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TMED2Q15363 201 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANGPT1Q15389 498 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms