RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PRORYQ9H606 182 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ZNF304Q9HCX3 659 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 GEMIN8Q9NWZ8 242 aaKnown RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ZFP69BQ9UJL9 534 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PLAAQ9Y263 795 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 URADA6NGE7 173 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 STX16-NPEPL1H3BU86 382 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 STX16O14662 325 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 P2RX6O15547 441 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 NDUFS4O43181 175 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 GLRA3O75311 464 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 CREG1O75629 220 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 PRKAR1AP10644 381 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 SPTBP11277 2137 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 ARL1P40616 181 aaPredicted RBP13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 OR1D4P47884 311 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 AVPR1BP47901 424 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 CYP4F2P78329 520 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 PWP1Q13610 501 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 ERV3-1Q14264 604 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 METTL2BQ6P1Q9 378 aaKnown RBP13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 FAM198BQ6UWH4 519 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 TMIGD1Q6UXZ0 262 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 MACROD1Q9BQ69 325 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 YIPF2Q9BWQ6 316 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 SPNS1Q9H2V7 528 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 SYNPO2LQ9H987 977 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 TMEM216Q9P0N5 145 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 ASB1Q9Y576 335 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
GTF3C3-206ENST00000448539 ANKDD1BA6NHY2 528 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 COPEO14579 308 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 NKX2-8O15522 239 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 SIX3O95343 332 aaPredicted RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 KRT4P19013 534 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 GSTM2P28161 218 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 RPS18P62269 152 aaKnown RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 SKP1P63208 163 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 OCA2Q04671 838 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 FAM53BQ14153 422 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 DOC2AQ14183 400 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 TBCCQ15814 346 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 OVCH1Q7RTY7 1134 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 CCT6BQ92526 530 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 ATP6V1E2Q96A05 226 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 WDR34Q96EX3 536 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 MMABQ96EY8 250 aaPredicted RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 IQCGQ9H095 443 aaKnown RBP13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 ANKHQ9HCJ1 492 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 TCFL5Q9UL49 500 aa13.34□□□□□ -0.27
GTF3C3-206ENST00000448539 HEATR5BQ9P2D3 2071 aa13.33□□□□□ -0.27
GTF3C3-206ENST00000448539 A0A0A6YYC8 382 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CDC14CA4D256 554 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 I3L1I5 382 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 MED26O95402 600 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 RECKO95980 971 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 ALBP02768 609 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CAPN1P07384 714 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 HPDP32754 393 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 FOLR3P41439 243 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 STXBP1P61764 594 aaKnown RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CDC20Q12834 499 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 HERC3Q15034 1050 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 KRT71Q3SY84 523 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CCDC153Q494R4 210 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 TMEM214Q6NUQ4 689 aaKnown RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 NIPAL1Q6NVV3 410 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 ABHD13Q7L211 337 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 GOLGA7Q7Z5G4 137 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 C4orf33Q8N1A6 199 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 ANKRD53Q8N9V6 530 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CCDC63Q8NA47 563 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 KCT2Q8NC54 265 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 PPP4R1Q8TF05 950 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 TMEM109Q9BVC6 243 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 IPPKQ9H8X2 491 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 ACTR8Q9H981 624 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms