RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
SF1-211ENST00000448404 TESCQ96BS2 214 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 CCDC138Q96M89 665 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 GPATCH2Q9NW75 528 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 ASIC5Q9NY37 505 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 MAN2B2Q9Y2E5 1009 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 PLEKHM1Q9Y4G2 1056 aa14.25□□□□□ -0.13
SF1-211ENST00000448404 EVPLLA8MZ36 301 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 FAM220BPB1ANY3 271 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 M0R129 80 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 EPN2O95208 641 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 C6orf47O95873 294 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 PRPS1L1P21108 318 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 CRATP43155 626 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 KCTD21Q4G0X4 260 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 CPTPQ5TA50 214 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 ZDHHC20Q5W0Z9 365 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 OLIG3Q7RTU3 272 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 COMMD6Q7Z4G1 85 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 SDCCAG3Q96C92 435 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 PLA2G2FQ9BZM2 168 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 TIMMDC1Q9NPL8 285 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 RASSF1Q9NS23 344 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 CUEDC1Q9NWM3 386 aaPredicted RBP14.24□□□□□ -0.13
SF1-211ENST00000448404 SNX11Q9Y5W9 270 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 GRXCR2A6NFK2 248 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 TMEM221A6NGB7 291 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 KLHL18O94889 574 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 LBX1P52954 281 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 DMC1Q14565 340 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 VMACQ2NL98 169 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 HNRNPA1L2Q32P51 320 aaKnown RBP14.24□□□□□ -0.13
SF1-211ENST00000448404 LIPJQ5W064 366 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 HEATR4Q86WZ0 1026 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 RASGRP3Q8IV61 690 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 OR56A3Q8NH54 315 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 GLMNQ92990 594 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 OTUB1Q96FW1 271 aaPredicted RBP14.24□□□□□ -0.13
SF1-211ENST00000448404 REXO5Q96IC2 774 aaKnown RBP14.24□□□□□ -0.13
SF1-211ENST00000448404 MARK1Q9P0L2 795 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 MAP4K5Q9Y4K4 846 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 KCNE2Q9Y6J6 123 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 SDK1Q7Z5N4 2213 aa14.24□□□□□ -0.13
SF1-211ENST00000448404 SCAMP2O15127 329 aaKnown RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 BMP10O95393 424 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 IDSP22304 550 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 DDX6P26196 483 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■□□□ 12
SF1-211ENST00000448404 P2RY2P41231 377 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 CDK9P50750 372 aaKnown RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 DAPP51397 102 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 SEC13P55735 322 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 ABHD18Q0P651 414 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 PPIGQ13427 754 aaKnown RBP eCLIP14.23□□□□□ -0.135e-11■□□□□ 9.8
SF1-211ENST00000448404 UAP1L1Q3KQV9 507 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 GRHL2Q6ISB3 625 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 FBXO46Q6PJ61 603 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 DCP2Q8IU60 420 aaKnown RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 SLC44A2Q8IWA5 706 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 SMYD1Q8NB12 490 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 CHDHQ8NE62 594 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 OR4A15Q8NGL6 344 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 CSGALNACT1Q8TDX6 532 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 C11orf24Q96F05 449 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 FOPNLQ96NB1 174 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 SH3GL1Q99961 368 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 TMEM106CQ9BVX2 250 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 XKR8Q9H6D3 395 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 MBNL1Q9NR56 388 aaKnown RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 KLHL42Q9P2K6 505 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 PADI4Q9UM07 663 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 FAF1Q9UNN5 650 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 TSPAN11A1L157 253 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 PIPSLA2A3N6 862 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 NME6O75414 186 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 GCM2O75603 506 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 PCDH8O95206 1070 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 ADH1CP00326 375 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 KDELR2P33947 212 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 TAS2R50P59544 299 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 MTAPQ13126 283 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 ANKDD1AQ495B1 522 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 SPATS1Q496A3 300 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 CCNYL2Q5T2Q4 361 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 CPZQ66K79 652 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
SF1-211ENST00000448404 KXD1Q9BQD3 176 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 OSBPL6Q9BZF3 934 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 LHPPQ9H008 270 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 AMBNQ9NP70 447 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 FZD3Q9NPG1 666 aa14.23□□□□□ -0.13
SF1-211ENST00000448404 LOC100130705A0A1B0GUX0 176 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 H3BMQ9 156 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 KPNA5O15131 536 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 SLC16A5O15375 505 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 AP2A2O94973 939 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 FUCA1P04066 466 aa14.22□□□□□ -0.13
SF1-211ENST00000448404 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
SF1-211ENST00000448404 ALDH4A1P30038 563 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms