RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ELP2Q6IA86 826 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC51BQ86UW2 128 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 NAA40Q86UY6 237 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 OR8S1Q8NH09 359 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SPRYD4Q8WW59 207 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC5A5Q92911 643 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 COL20A1Q9P218 1284 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 VWA7Q9Y334 891 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 ATP7BP35670 1465 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 EI24O14681 340 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 KDELR3O43731 214 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 DFNA5O60443 496 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 COQ9O75208 318 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 MZT1Q08AG7 82 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 UGT8Q16880 541 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 CLVS2Q5SYC1 327 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 M1APQ8TC57 530 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 GPR151Q8TDV0 419 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC22A18Q96BI1 424 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 EFCAB11Q9BUY7 163 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 KLK14Q9P0G3 267 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 PCYOX1Q9UHG3 505 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 PSAT1Q9Y617 370 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 FGF19O95750 216 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 MC2RQ01718 297 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC6A3Q01959 620 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 BAGE2Q86Y30 109 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 KCNF1Q9H3M0 494 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TESMINQ9Y4I5 508 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 NPIPA5A0A0B4J1W7 369 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FTCDNL1E5RQL4 147 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 B3GALNT1O75752 331 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CUZD1Q86UP6 607 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CACUL1Q86Y37 369 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 OR1J4Q8NGS1 313 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 RBP7Q96R05 134 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 MYOCQ99972 504 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FAM173AQ9BQD7 235 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 OR12D3Q9UGF7 316 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 POLEQ07864 2286 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 EIF4EP06730 217 aaKnown RBP8.7□□□□□ -1.02
NIPBL-202ENST00000448238 BLKP51451 505 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FOXK1P85037 733 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 MTMR2Q13614 643 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 BAATQ14032 418 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-202ENST00000448238 NPTX1Q15818 432 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ANGEL2Q5VTE6 544 aaKnown RBP8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 C16orf86Q6ZW13 317 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ABHD13Q7L211 337 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 TPRA1Q86W33 373 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 SLC22A17Q8WUG5 538 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 SMPDL3AQ92484 453 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 TSSK3Q96PN8 268 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 SLC25A31Q9H0C2 315 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 PRRC2BQ5JSZ5 2229 aaKnown RBP8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CRHR1P34998 444 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FCGRTP55899 365 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 C16orf59Q7L2K0 433 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 LPGAT1Q92604 370 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 EXOSC8Q96B26 276 aaKnown RBP8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FAM83CQ9BQN1 747 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 RAB11FIP5Q9BXF6 653 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ZDHHC11Q9H8X9 412 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 OR6C74A6NCV1 312 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 GPR137BO60478 399 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 GPR153Q6NV75 609 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ANKS1BQ7Z6G8 1248 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 TSPEARQ8WU66 669 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 SMPDL3BQ92485 455 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 EDEM1Q92611 657 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 MRI1Q9BV20 369 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 HLA-HP01893 362 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 PSMB4P28070 264 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CHRNA4P43681 627 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 SCAPQ12770 1279 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 TBC1D16Q8TBP0 767 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 STON2Q8WXE9 905 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 COQ10AQ96MF6 247 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ALG12Q9BV10 488 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 TMEM109Q9BVC6 243 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 ASB7Q9H672 318 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 LGR5O75473 907 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 HBE1P02100 147 aa8.7□□□□□ -1.02
NIPBL-202ENST00000448238 CETPP11597 493 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms