RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 AKAP14Q86UN6 197 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 POC5Q8NA72 575 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 DENND6BQ8NEG7 585 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 OR2AP1Q8NGE2 309 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ZNF675Q8TD23 568 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 HTRA1Q92743 480 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 COL21A1Q96P44 957 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 TMEM184CQ9NVA4 438 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PCDHGA2Q9Y5H1 932 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 A8MVJ9 347 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 UPK3BL1B0FP48 263 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 UPK3BL2E5RIL1 263 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 TNFRSF11BO00300 401 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 HOXA2O43364 376 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 GCM2O75603 506 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ABLIM3O94929 683 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 KCNK2O95069 426 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 DBTP11182 482 aaKnown RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ANXA8P13928 327 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 GABRB1P18505 474 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 S100A5P33763 92 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 GSSP48637 474 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 EIF4HQ15056 248 aaKnown RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ATAD3BQ5T9A4 648 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ANXA8L1Q5VT79 327 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 USP45Q70EL2 814 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ZNF513Q8N8E2 541 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 C11orf65Q8NCR3 313 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 VPS37AQ8NEZ2 397 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 DBF4BQ8NFT6 615 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ZNF461Q8TAF7 563 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 CHAC2Q8WUX2 184 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 CHTF18Q8WVB6 975 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ECHDC3Q96DC8 303 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 MCCC1Q96RQ3 725 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ABCB8Q9NUT2 735 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 POFUT2Q9Y2G5 429 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 GABRR3A8MPY1 467 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 KPNA5O15131 536 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 GRK5P34947 590 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 OLR1P78380 273 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 KRR1Q13601 381 aaKnown RBP18.4■□□□□ 0.54
SDCBP-204ENST00000447182 IRF3Q14653 427 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 CPTPQ5TA50 214 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 TMEM150AQ86TG1 271 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 CRIPAKQ8N1N5 446 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 DEPDC4Q8N2C3 294 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 OR4C15Q8NGM1 316 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 BHMTQ93088 406 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 SLC22A12Q96S37 553 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 ATG10Q9H0Y0 220 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 BRF2Q9HAW0 419 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 TMPRSS11EQ9UL52 423 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 YIPF1Q9Y548 306 aa18.4■□□□□ 0.54
SDCBP-204ENST00000447182 H0YIV9 168 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 SNPHO15079 494 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 AOC2O75106 756 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 OXSR1O95747 527 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-204ENST00000447182 ADORA3P0DMS8 318 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 ATP1B2P14415 290 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-204ENST00000447182 ETV6P41212 452 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 SEMG2Q02383 582 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 ELOAQ14241 798 aaKnown RBP18.39■□□□□ 0.53
SDCBP-204ENST00000447182 TOR1AIP1Q5JTV8 583 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 NPAS3Q8IXF0 933 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 PARP16Q8N5Y8 322 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 SLC5A8Q8N695 610 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 OR10G2Q8NGC3 310 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 COQ8BQ96D53 544 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 CRELD1Q96HD1 420 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 CLSTN3Q9BQT9 956 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 KLK4Q9Y5K2 254 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 PEX16Q9Y5Y5 336 aa18.39■□□□□ 0.53
SDCBP-204ENST00000447182 TBKBP1A7MCY6 615 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 HAT1O14929 419 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 SNX4O95219 450 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 SELPP16109 830 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 LHCGRP22888 699 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 RAE1P78406 368 aaKnown RBP18.38■□□□□ 0.53
SDCBP-204ENST00000447182 ZXDBP98169 803 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 LRRC74AQ0VAA2 488 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 GAB1Q13480 694 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 XKR6Q5GH73 641 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF605Q86T29 641 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 SLC43A3Q8NBI5 491 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 MAL2Q969L2 176 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 MTERF1Q99551 399 aaKnown RBP18.38■□□□□ 0.53
SDCBP-204ENST00000447182 AMBNQ9NP70 447 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF226Q9NYT6 803 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF282Q9UDV7 671 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-204ENST00000447182 VPS4AQ9UN37 437 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 ZNF451Q9Y4E5 1061 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 KIAA1671Q9BY89 1806 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 KRT87PA6NCN2 255 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 TMEM88BA6NKF7 163 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 PLK4O00444 970 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 TLL1O43897 1013 aa18.38■□□□□ 0.53
SDCBP-204ENST00000447182 DLGAP3O95886 979 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms