RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 COMMD2Q86X83 199 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARHGAP24Q8N264 748 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 BMPERQ8N8U9 685 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 RASGEF1AQ8N9B8 481 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC5A11Q8WWX8 675 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARHGAP45Q92619 1136 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 THRSPQ92748 146 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SEMA4DQ92854 862 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 DAZLQ92904 295 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLCO4A1Q96BD0 722 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PHF21AQ96BD5 680 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 DHX58Q96C10 678 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 NAF1Q96HR8 494 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ASCL2Q99929 193 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 C17orf62Q9BQA9 187 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 CARD6Q9BX69 1037 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 IDI2Q9BXS1 227 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRRG4Q9BZD6 226 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 LRMDAQ9H2I8 198 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ECT2Q9H8V3 914 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SERINC1Q9NRX5 453 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 CENPMQ9NSP4 180 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 TCP11L1Q9NUJ3 509 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 MIOSQ9NXC5 875 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 B3GAT1Q9P2W7 334 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PROCRQ9UNN8 238 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 WDR37Q9Y2I8 494 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SPIN1Q9Y657 262 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZCCHC6Q5VYS8 1495 aaKnown RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A087X0K7 114 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A0B4J203 849 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A1B0GWJ7 208 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANKRD66B4E2M5 251 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRSS46E5RG02 174 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 BUB3O43684 328 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 GPR137BO60478 399 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 SCGB2A1O75556 95 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 RPS6KA5O75582 802 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 WDPCPO95876 746 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 KRT6BP04259 564 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 STAG3L1P0CL83 205 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 CPA3P15088 417 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF23P17027 643 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 FUT1P19526 365 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 AHRP35869 848 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 KRT6CP48668 564 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 CNN1P51911 297 aaKnown RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 ACTR1AP61163 376 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 POU3F1Q03052 451 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC34A1Q06495 639 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARL16Q0P5N6 197 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 LCP2Q13094 533 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 SPP2Q13103 211 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAPSNQ13702 412 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 ACKR1Q16570 336 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR7E24Q6IFN5 339 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM166AQ6J272 317 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 C11orf63Q6NUN7 778 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 KLC3Q6P597 504 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM171BQ6P995 826 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 PLXDC2Q6UX71 529 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 PLEKHM3Q6ZWE6 761 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 UNC5CLQ8IV45 518 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 CIARTQ8N365 385 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 THAP8Q8NA92 274 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 PYCR2Q96C36 320 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 LINGO1Q96FE5 620 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 THOC1Q96FV9 657 aaKnown RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 LRRC1Q9BTT6 524 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 CDK19Q9BWU1 502 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 Q9H8V8 135 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 FKRPQ9H9S5 495 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 GPR173Q9NS66 373 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 DONSONQ9NYP3 566 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 LRWD1Q9UFC0 647 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 NOCTQ9UK39 431 aaKnown RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 POU2F3Q9UKI9 436 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 PLA2G4CQ9UP65 541 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 JRKLQ9Y4A0 524 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 YIPF1Q9Y548 306 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 DISP3Q9P2K9 1392 aa4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 BAZ1BQ9UIG0 1483 aaKnown RBP4.11□□□□□ -1.75
HMGB1P48-201ENST00000446155 A0A087WZY1 265 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM129A0AVI4 362 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 CASTOR2A6NHX0 329 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 F8VVB4 439 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 F8VWA3 439 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 CLDN3O15551 220 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 BUD23O43709 281 aaKnown RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ATP6V1G1O75348 118 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 BMP10O95393 424 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 IGHV4-39P01824 125 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 MMP10P09238 476 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 IRF2P14316 349 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF18P17022 549 aa4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 ELAVL4P26378 380 aaKnown RBP4.1□□□□□ -1.75
HMGB1P48-201ENST00000446155 MARK3P27448 753 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms