RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PIK3CBP42338 1070 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 HTR6P50406 440 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 PHEXP78562 749 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 ACY1Q03154 408 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 TUBB8Q3ZCM7 444 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 C10orf62Q5T681 223 aaPredicted RBP16.63■□□□□ 0.25
SGCE-206ENST00000445866 VN1R4Q7Z5H5 301 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 ASPGQ86U10 573 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 TMPRSS12Q86WS5 348 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 DDIASQ8IXT1 998 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 CHCHD4Q8N4Q1 142 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 CAMKVQ8NCB2 501 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 PIWIL2Q8TC59 973 aaKnown RBP16.63■□□□□ 0.25
SGCE-206ENST00000445866 CREB3L4Q8TEY5 395 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 ZNF473Q8WTR7 871 aaKnown RBP16.63■□□□□ 0.25
SGCE-206ENST00000445866 HBEGFQ99075 208 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 SPRTNQ9H040 489 aaPredicted RBP16.63■□□□□ 0.25
SGCE-206ENST00000445866 SYNPO2LQ9H987 977 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 ASXL3Q9C0F0 2248 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 SPEGQ15772 3267 aa16.63■□□□□ 0.25
SGCE-206ENST00000445866 MAGEB17A8MXT2 336 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 FOXE1O00358 373 aaPredicted RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 NDUFS4O43181 175 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CTSBP07858 339 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 PTX3P26022 381 aaPredicted RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 GSTM2P28161 218 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 GABRA4P48169 554 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 RPS13P62277 151 aaKnown RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.25
SGCE-206ENST00000445866 VN1R5Q7Z5H4 357 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 WDR75Q8IWA0 830 aaKnown RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 CSNK1A1LQ8N752 337 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 TWIST2Q8WVJ9 160 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 TM4SF19Q96DZ7 209 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CHMP6Q96FZ7 201 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 SEC16BQ96JE7 1060 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 ZNF317Q96PQ6 595 aaPredicted RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 OR6C1Q96RD1 312 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 FANCEQ9HB96 536 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 PFDN4Q9NQP4 134 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 FGFR1OP2Q9NVK5 253 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 DLL3Q9NYJ7 618 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 TSC22D4Q9Y3Q8 395 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 DMXL1Q9Y485 3027 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CLEC3AO75596 197 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 MSL3P1P0C860 447 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CCL4P13236 92 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 SEC24CP53992 1094 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 RGS1Q08116 209 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 TUBB3Q13509 450 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 PWP1Q13610 501 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 TCTE1Q5JU00 501 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CHSY3Q70JA7 882 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 RAB11FIP2Q7L804 512 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 GPR135Q8IZ08 494 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 ZNF655Q8N720 491 aaPredicted RBP16.62■□□□□ 0.25
SGCE-206ENST00000445866 ADAMTS14Q8WXS8 1223 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 USP7Q93009 1102 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 CMTM7Q96FZ5 175 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 PPP1R36Q96LQ0 422 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 OR51B5Q9H339 312 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 TUBB1Q9H4B7 451 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 DMRT3Q9NQL9 472 aa16.62■□□□□ 0.25
SGCE-206ENST00000445866 COL5A1P20908 1838 aaPredicted RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 ZFC3H1O60293 1989 aaKnown RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 GMNCA6NCL1 334 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 SLC28A1O00337 649 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 TXNDC9O14530 226 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 PIP5K1BO14986 540 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 HDAC3O15379 428 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 SKAP2O75563 359 aaPredicted RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 OR2B3O76000 313 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 SERPINA6P08185 405 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 SLC35G6P0C7Q6 338 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 ZNF33BQ06732 778 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 IMPG1Q17R60 797 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 MANEAQ5SRI9 462 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 CACTIN-AS1Q8N1I8 211 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 GBP7Q8N8V2 638 aaPredicted RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 OR1L3Q8NH93 324 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 ZNF501Q96CX3 271 aaPredicted RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
SGCE-206ENST00000445866 F2RL3Q96RI0 385 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 CCT7Q99832 543 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 NUF2Q9BZD4 464 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 PSD3Q9NYI0 1048 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 SLC12A4Q9UP95 1085 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 LOXL2Q9Y4K0 774 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 PTGDR2Q9Y5Y4 395 aa16.61■□□□□ 0.25
SGCE-206ENST00000445866 LRIT2A6NDA9 550 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 POLR1CO15160 346 aaPredicted RBP16.6■□□□□ 0.25
SGCE-206ENST00000445866 ITGA1P56199 1179 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 HMGCS1Q01581 520 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 MC2RQ01718 297 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 BTKQ06187 659 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms