RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SLC39A1Q9NY26 324 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 RAP2CQ9Y3L5 183 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 DMXL1Q9Y485 3027 aa12.59□□□□□ -0.39
TIMP1-204ENST00000445623 LOC105369274A0A096LPK9 316 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 LOC102723532A0A0G2JNH3 316 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FFAR3O14843 346 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 GPR42O15529 346 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 LCMT2O60294 686 aaKnown RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ULK1O75385 1050 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 CLEC3AO75596 197 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 LYPLA1O75608 230 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FGF4P08620 206 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 HBQ1P09105 142 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FGF5P12034 268 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 CCL4P13236 92 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 MAPK10P53779 464 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 CYP4F2P78329 520 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 DDX39BQ13838 428 aaKnown RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 NDUFA9Q16795 377 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 YOD1Q5VVQ6 348 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 OR4N4Q8N0Y3 316 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ANKRD53Q8N9V6 530 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 WDR20Q8TBZ3 569 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 FAR2Q96K12 515 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF285Q96NJ3 590 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 TAAR9Q96RI9 348 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 DDA1Q9BW61 102 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SLC7A5P2Q9GIP4 190 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 PISDQ9UG56 409 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF225Q9UK10 706 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF490Q9ULM2 529 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 SATB2Q9UPW6 733 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 TRAF6Q9Y4K3 522 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 PCDHGA8Q9Y5G5 932 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
TIMP1-204ENST00000445623 KNTC1P50748 2209 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 FOXE1O00358 373 aaPredicted RBP12.57□□□□□ -0.4
TIMP1-204ENST00000445623 MANBAO00462 879 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 ITM2AO43736 263 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
TIMP1-204ENST00000445623 SERPINA6P08185 405 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 ITIH1P19827 911 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 ARSFP54793 590 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 EMP3P54852 163 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 SKP1P63208 163 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 GABREP78334 506 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 TGM3Q08188 693 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 FAM214AQ32MH5 1076 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
TIMP1-204ENST00000445623 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 KANK2Q63ZY3 851 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 RGS9BPQ6ZS82 235 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 CRLF3Q8IUI8 442 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 TMEM126BQ8IUX1 230 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 OR1L3Q8NH93 324 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 HUS1BQ8NHY5 278 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF473Q8WTR7 871 aaKnown RBP12.57□□□□□ -0.4
TIMP1-204ENST00000445623 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 CMTM7Q96FZ5 175 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 NDC1Q9BTX1 674 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 NRSN2Q9GZP1 204 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 BRF2Q9HAW0 419 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 DMRT3Q9NQL9 472 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 NMRK1Q9NWW6 199 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
TIMP1-204ENST00000445623 A0A088AWK7 358 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HCRTR1O43613 425 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 SCRG1O75711 98 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HSD3B1P14060 373 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF10P21506 573 aaPredicted RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HSD3B2P26439 372 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 RBMS1P29558 406 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 MDH1P40925 334 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HK2P52789 917 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 OCRLQ01968 901 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 CSTF3Q12996 717 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 MUM1Q2TAK8 710 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms