RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GABRR3A8MPY1 467 aa15.05■□□□□ 0
SNX13-204ENST00000444712 PDZK1P1A8MUH7 402 aa15.05■□□□□ 0
SNX13-204ENST00000444712 CLIC1O00299 241 aa15.05■□□□□ 0
SNX13-204ENST00000444712 TOR1BO14657 336 aa15.05■□□□□ 0
SNX13-204ENST00000444712 TPST1O60507 370 aa15.05■□□□□ 0
SNX13-204ENST00000444712 APBB3O95704 486 aa15.05■□□□□ 0
SNX13-204ENST00000444712 FUCA1P04066 466 aa15.05■□□□□ 0
SNX13-204ENST00000444712 GSNP06396 782 aa15.05■□□□□ 0
SNX13-204ENST00000444712 UBTFL6P0CB48 400 aaPredicted RBP15.05■□□□□ 0
SNX13-204ENST00000444712 HNRNPA2B1P22626 353 aaKnown RBP15.05■□□□□ 0
SNX13-204ENST00000444712 NDUFS1P28331 727 aa15.05■□□□□ 0
SNX13-204ENST00000444712 PKLRP30613 574 aa15.05■□□□□ 0
SNX13-204ENST00000444712 CDKN2CP42773 168 aa15.05■□□□□ 0
SNX13-204ENST00000444712 CHN2P52757 468 aa15.05■□□□□ 0
SNX13-204ENST00000444712 MEF2AQ02078 507 aaPredicted RBP15.05■□□□□ 0
SNX13-204ENST00000444712 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ 0
SNX13-204ENST00000444712 NFATC4Q14934 902 aa15.05■□□□□ 0
SNX13-204ENST00000444712 PAGE2Q7Z2X7 111 aa15.05■□□□□ 0
SNX13-204ENST00000444712 TTLQ8NG68 377 aa15.05■□□□□ 0
SNX13-204ENST00000444712 OR4K1Q8NGD4 311 aa15.05■□□□□ 0
SNX13-204ENST00000444712 NCLNQ969V3 563 aa15.05■□□□□ 0
SNX13-204ENST00000444712 WDR92Q96MX6 357 aa15.05■□□□□ 0
SNX13-204ENST00000444712 QRFPRQ96P65 431 aa15.05■□□□□ 0
SNX13-204ENST00000444712 SEPHS2Q99611 448 aa15.05■□□□□ 0
SNX13-204ENST00000444712 TBCDQ9BTW9 1192 aa15.05■□□□□ 0
SNX13-204ENST00000444712 ACAT2Q9BWD1 397 aa15.05■□□□□ 0
SNX13-204ENST00000444712 CHID1Q9BWS9 393 aa15.05■□□□□ 0
SNX13-204ENST00000444712 SPNS1Q9H2V7 528 aa15.05■□□□□ 0
SNX13-204ENST00000444712 OR51B5Q9H339 312 aa15.05■□□□□ 0
SNX13-204ENST00000444712 FZD3Q9NPG1 666 aa15.05■□□□□ 0
SNX13-204ENST00000444712 SLC6A13Q9NSD5 602 aa15.05■□□□□ 0
SNX13-204ENST00000444712 COLEC10Q9Y6Z7 277 aa15.05■□□□□ 0
SNX13-204ENST00000444712 SH3BGRLO75368 114 aa15.05■□□□□ -0
SNX13-204ENST00000444712 SMNDC1O75940 238 aaKnown RBP eCLIP15.05■□□□□ -0
SNX13-204ENST00000444712 CCNDBP1O95273 360 aa15.05■□□□□ -0
SNX13-204ENST00000444712 LAMP1P11279 417 aa15.05■□□□□ -0
SNX13-204ENST00000444712 GPX2P18283 190 aa15.05■□□□□ -0
SNX13-204ENST00000444712 NDUFV2P19404 249 aa15.05■□□□□ -0
SNX13-204ENST00000444712 IGFBP4P22692 258 aa15.05■□□□□ -0
SNX13-204ENST00000444712 GSTM2P28161 218 aa15.05■□□□□ -0
SNX13-204ENST00000444712 SOX11P35716 441 aa15.05■□□□□ -0
SNX13-204ENST00000444712 GZMMP51124 257 aa15.05■□□□□ -0
SNX13-204ENST00000444712 MLF2Q15773 248 aaPredicted RBP15.05■□□□□ -0
SNX13-204ENST00000444712 NRF1Q16656 503 aa15.05■□□□□ -0
SNX13-204ENST00000444712 DUS1LQ6P1R4 473 aaKnown RBP15.05■□□□□ -0
SNX13-204ENST00000444712 ZNF621Q6ZSS3 439 aa15.05■□□□□ -0
SNX13-204ENST00000444712 ARMCX6Q7L4S7 300 aa15.05■□□□□ -0
SNX13-204ENST00000444712 FAM124AQ86V42 546 aa15.05■□□□□ -0
SNX13-204ENST00000444712 PHACTR4Q8IZ21 702 aa15.05■□□□□ -0
SNX13-204ENST00000444712 ST13P4Q8IZP2 240 aaPredicted RBP15.05■□□□□ -0
SNX13-204ENST00000444712 EID3Q8N140 333 aa15.05■□□□□ -0
SNX13-204ENST00000444712 NATD1Q8N6N6 113 aa15.05■□□□□ -0
SNX13-204ENST00000444712 MFSD2AQ8NA29 543 aa15.05■□□□□ -0
SNX13-204ENST00000444712 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.05■□□□□ -03e-7■■■■■ 37.7
SNX13-204ENST00000444712 MIEF2Q96C03 454 aa15.05■□□□□ -0
SNX13-204ENST00000444712 CARS2Q9HA77 564 aaKnown RBP15.05■□□□□ -0
SNX13-204ENST00000444712 DLGAP2Q9P1A6 1054 aa15.05■□□□□ -0
SNX13-204ENST00000444712 LIMD1Q9UGP4 676 aa15.05■□□□□ -0
SNX13-204ENST00000444712 VPS4AQ9UN37 437 aa15.05■□□□□ -0
SNX13-204ENST00000444712 AP1M2Q9Y6Q5 423 aa15.05■□□□□ -0
SNX13-204ENST00000444712 A0A1W2PPV9 198 aa15.04■□□□□ -0
SNX13-204ENST00000444712 TNFRSF10CO14798 259 aa15.04■□□□□ -0
SNX13-204ENST00000444712 CREG1O75629 220 aa15.04■□□□□ -0
SNX13-204ENST00000444712 CPSF4O95639 269 aaKnown RBP15.04■□□□□ -0
SNX13-204ENST00000444712 YPEL5P62699 121 aa15.04■□□□□ -0
SNX13-204ENST00000444712 ABATP80404 500 aa15.04■□□□□ -0
SNX13-204ENST00000444712 PDE7AQ13946 482 aa15.04■□□□□ -0
SNX13-204ENST00000444712 WASH2PQ6VEQ5 465 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SPRED1Q7Z699 444 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SLC9B2Q86UD5 537 aa15.04■□□□□ -0
SNX13-204ENST00000444712 PGBD3Q8N328 593 aa15.04■□□□□ -0
SNX13-204ENST00000444712 C2orf73Q8N5S3 287 aaPredicted RBP15.04■□□□□ -0
SNX13-204ENST00000444712 TBC1D19Q8N5T2 526 aa15.04■□□□□ -0
SNX13-204ENST00000444712 C16orf78Q8WTQ4 265 aa15.04■□□□□ -0
SNX13-204ENST00000444712 FAM3CQ92520 227 aa15.04■□□□□ -0
SNX13-204ENST00000444712 MS4A8Q9BY19 250 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SH3BP4Q9P0V3 963 aa15.04■□□□□ -0
SNX13-204ENST00000444712 PCDHGB4Q9UN71 923 aa15.04■□□□□ -0
SNX13-204ENST00000444712 RNF103-CHMP3A0A140T963 221 aa15.04■□□□□ -0
SNX13-204ENST00000444712 TCRBV21S2A2A0A5A6 115 aa15.04■□□□□ -0
SNX13-204ENST00000444712 A6NHS1 94 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SAC3D1A6NKF1 404 aa15.04■□□□□ -0
SNX13-204ENST00000444712 H3BQ06 376 aaPredicted RBP15.04■□□□□ -0
SNX13-204ENST00000444712 ENGP17813 658 aa15.04■□□□□ -0
SNX13-204ENST00000444712 AKT2P31751 481 aa15.04■□□□□ -0
SNX13-204ENST00000444712 GRK3P35626 688 aa15.04■□□□□ -0
SNX13-204ENST00000444712 TPMTP51580 245 aa15.04■□□□□ -0
SNX13-204ENST00000444712 PRDX1Q06830 199 aaKnown RBP15.04■□□□□ -0
SNX13-204ENST00000444712 CCINQ13939 588 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SF1Q15637 639 aaKnown RBP15.04■□□□□ -0
SNX13-204ENST00000444712 DEPDC1Q5TB30 811 aa15.04■□□□□ -0
SNX13-204ENST00000444712 KHDRBS2Q5VWX1 349 aaKnown RBP15.04■□□□□ -0
SNX13-204ENST00000444712 CPZQ66K79 652 aa15.04■□□□□ -0
SNX13-204ENST00000444712 FAM71E1Q6IPT2 247 aa15.04■□□□□ -0
SNX13-204ENST00000444712 TRIML2Q8N7C3 387 aa15.04■□□□□ -0
SNX13-204ENST00000444712 LMNTD1Q8N9Z9 388 aa15.04■□□□□ -0
SNX13-204ENST00000444712 ZNF740Q8NDX6 193 aa15.04■□□□□ -0
SNX13-204ENST00000444712 PPCDCQ96CD2 204 aa15.04■□□□□ -0
SNX13-204ENST00000444712 SLC47A1Q96FL8 570 aa15.04■□□□□ -0
SNX13-204ENST00000444712 AURKBQ96GD4 344 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms