RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ACAT1P24752 427 aaKnown RBP3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 HOXC13P31276 330 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 KRT20P35900 424 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 CAPGP40121 348 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 PGFP49763 221 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 OR1D5P58170 312 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 RIGQ13278 110 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 COG2Q14746 738 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 FGD3Q5JSP0 725 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 SLC47A2Q86VL8 602 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 FAM131BQ86XD5 332 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 TICAM2Q86XR7 235 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 CCDC60Q8IWA6 550 aaPredicted RBP3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 POM121L12Q8N7R1 296 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 CCDC63Q8NA47 563 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 VPS33AQ96AX1 596 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 RMDN2Q96LZ7 410 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 NAA11Q9BSU3 229 aaPredicted RBP3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 SLC25A23Q9BV35 468 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 KATNB1Q9BVA0 655 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 PARLQ9H300 379 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 SNX25Q9H3E2 840 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 RABEP2Q9H5N1 569 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 GPN1Q9HCN4 374 aaPredicted RBP3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 NKIRAS2Q9NYR9 191 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 PKD2L2Q9NZM6 624 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 IL36AQ9UHA7 158 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 BAIAP2L1Q9UHR4 511 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 CFTRP13569 1480 aa3.53□□□□□ -1.84
AC003001.1-201ENST00000443247 WIZO95785 1651 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 TARBP1Q13395 1621 aaKnown RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 IL16Q14005 1332 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 DNMBPQ6XZF7 1577 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ARID2Q68CP9 1835 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 IGHV4-30-2A0A087WSY4 118 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 A8MXE2 369 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 TBX10O75333 385 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 EPORP19235 508 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 AOC1P19801 751 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 EEF1DP29692 281 aaKnown RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 CD300CQ08708 224 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ALDH1L2Q3SY69 923 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 TCP11X2Q5H9J9 407 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ATP1A1-AS1Q5TC04 95 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 CPEB2Q7Z5Q1 589 aaKnown RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 PIGWQ7Z7B1 504 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 AMIGO1Q86WK6 493 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 FAM219AQ8IW50 185 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ABHD12Q8N2K0 398 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 LSMEM1Q8N8F7 131 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 NPRL2Q8WTW4 380 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 CHURC1Q8WUH1 139 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 NEDD4LQ96PU5 975 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 FAM129AQ9BZQ8 928 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 TMX4Q9H1E5 349 aaPredicted RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ST6GALNAC4Q9H4F1 302 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 GNB4Q9HAV0 340 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 PHPT1Q9NRX4 125 aaPredicted RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 NLGN3Q9NZ94 848 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 THAP10Q9P2Z0 257 aaPredicted RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 CTSZQ9UBR2 303 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 PILRBQ9UKJ0 227 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 TTLL3Q9Y4R7 772 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 LIPGQ9Y5X9 500 aa3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ZNF608Q9ULD9 1512 aaPredicted RBP3.52□□□□□ -1.85
AC003001.1-201ENST00000443247 ABCC8Q09428 1581 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 MROH2BQ7Z745 1585 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 HECW2Q9P2P5 1572 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 A0A087WZ39 114 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 A0A1W2PPW3 197 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 GLTPD2A6NH11 291 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 ACOD1A6NK06 481 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 F8VVB4 439 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 F8VWA3 439 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 RTCAO00442 366 aaKnown RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 TLX2O43763 284 aaPredicted RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 ECE2O60344 883 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 SNAP91O60641 907 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 SAP30O75446 220 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 NXPH4O95158 308 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 LUC7L3O95232 432 aaKnown RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 POP4O95707 220 aaKnown RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 PENKP01210 267 aaPredicted RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 CD59P13987 128 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 MYOGP15173 224 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 CDC25CP30307 473 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 PTGER3P43115 390 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 CLCN4P51793 760 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 DUSP5Q16690 384 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 HYAL4Q2M3T9 481 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 MS4A18Q3C1V0 323 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 TTC27Q6P3X3 843 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 PRSS55Q6UWB4 352 aaPredicted RBP3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 CHST3Q7LGC8 479 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 ANKRD33Q7Z3H0 272 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 OR10G7Q8NGN6 311 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 P2RX5Q93086 422 aa3.51□□□□□ -1.85
AC003001.1-201ENST00000443247 PDLIM5Q96HC4 596 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms