RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MLIPQ5VWP3 458 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PRMT9Q6P2P2 845 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 TMIGD1Q6UXZ0 262 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 GOLGA7Q7Z5G4 137 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 SRRM1Q8IYB3 904 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 ARHGEF39Q8N4T4 335 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 DTWD1Q8N5C7 304 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 METTL27Q8N6F8 245 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 ANKRD53Q8N9V6 530 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 TRPV3Q8NET8 790 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 MOCOSQ96EN8 888 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 SLC45A3Q96JT2 553 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 ZIM3Q96PE6 472 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 RUFY1Q96T51 708 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 C17orf62Q9BQA9 187 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PITHD1Q9GZP4 211 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 NT5DC2Q9H857 520 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 IPPKQ9H8X2 491 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 ZNF490Q9ULM2 529 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 CDC14AQ9UNH5 594 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PCDHGA6Q9Y5G7 932 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 MRPS18BQ9Y676 258 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 SNRNP200O75643 2136 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 MAP1BP46821 2468 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 K7ENP7 123 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 PLIN3O60664 434 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 WFS1O76024 890 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 PROCP04070 461 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CAPN1P07384 714 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CD22P20273 847 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ITGAXP20702 1163 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 PTPN4P29074 926 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 OR1D4P47884 311 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CYP4F2P78329 520 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 NFKB2Q00653 900 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 RGS1Q08116 209 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 PCM1Q15154 2024 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 COL28A1Q2UY09 1125 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CEP85LQ5SZL2 805 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ARHGAP40Q5TG30 622 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 INO80CQ6PI98 192 aaPredicted RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 FAM198BQ6UWH4 519 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 LRIG3Q6UXM1 1119 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 SLC22A9Q8IVM8 553 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ENDOVQ8N8Q3 282 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 BANPQ8N9N5 519 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CCDC63Q8NA47 563 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 KCT2Q8NC54 265 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 TTLQ8NG68 377 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 NT5CQ8TCD5 201 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 UBE2E3Q969T4 207 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ATP6V1E2Q96A05 226 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 MMABQ96EY8 250 aaPredicted RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 CRELD1Q96HD1 420 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 DRC3Q9H069 523 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 C12orf65Q9H3J6 166 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ACTL8Q9H568 366 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 ACTR8Q9H981 624 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 SLC22A11Q9NSA0 550 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 COPG2Q9UBF2 871 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 PCTPQ9UKL6 214 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 USP24Q9UPU5 2620 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 MRPS2Q9Y399 296 aaKnown RBP11.73□□□□□ -0.53
USP1-203ENST00000442679 MAU2Q9Y6X3 613 aa11.73□□□□□ -0.53
USP1-203ENST00000442679 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 ANKDD1BA6NHY2 528 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ZNF891A8MT65 544 aaPredicted RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 G3V2L1 256 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 OR7A17O14581 309 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 NKX2-8O15522 239 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 FOXS1O43638 330 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 SPAG7O75391 227 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ONECUT2O95948 504 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 RPS17P08708 135 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 CD63P08962 238 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 MYL2P10916 166 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 IMPDH1P20839 514 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 FBLP22087 321 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 GSTM2P28161 218 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 AVPR1BP47901 424 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 PRKAA2P54646 552 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 HERVK_113P63132 956 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 SNRPNP63162 240 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 MC1RQ01726 317 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms