RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CD58P19256 250 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 UBA1P22314 1058 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CNTFP26441 200 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EIF2S3P41091 472 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CLDN6P56747 220 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TAS2R60P59551 318 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RAC1P63000 192 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GAD2Q05329 585 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SGCGQ13326 291 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EXOSC2Q13868 293 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 RAB33AQ14088 237 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TCEAL1Q15170 157 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMAD2Q15796 467 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CHRNA6Q15825 494 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ETFDHQ16134 617 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BAK1Q16611 211 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MEP1AQ16819 746 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TATDN3Q17R31 274 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COL28A1Q2UY09 1125 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EIF2S3LQ2VIR3 472 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SEZ6Q53EL9 994 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PYDC2Q56P42 97 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CLLU1Q5K131 121 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SAPCD1Q5SSQ6 148 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ANXA8L1Q5VT79 327 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LIPNQ5VXI9 398 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 VASNQ6EMK4 673 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC25A25Q6KCM7 469 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MSANTD2Q6P1R3 559 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZCCHC12Q6PEW1 402 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SUSD1Q6UWL2 747 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RAB44Q7Z6P3 723 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 COMTD1Q86VU5 262 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SGMS1Q86VZ5 419 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CCDC71Q8IV32 467 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SCN4BQ8IWT1 228 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FAM126BQ8IXS8 530 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BLIDQ8IZY5 108 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SYNPOQ8N3V7 929 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MFSD2AQ8NA29 543 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 OR52K1Q8NGK4 314 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 IL31RAQ8NI17 732 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SETD6Q8TBK2 473 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 WFIKKN2Q8TEU8 576 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF384Q8TF68 577 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MAFIPQ8WZ33 124 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 KAT5Q92993 513 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EXT2Q93063 718 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RFKQ969G6 155 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TADA1Q96BN2 335 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FAF2Q96CS3 445 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AP2M1Q96CW1 435 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COQ10AQ96MF6 247 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 Q96MT0 163 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ERMAPQ96PL5 475 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 TMEM47Q9BQJ4 181 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CCDC32Q9BV29 185 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RBCK1Q9BYM8 510 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPR61Q9BZJ8 451 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 WDR55Q9H6Y2 383 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 UNKLQ9H9P5 680 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 HEBP1Q9NRV9 189 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZFP57Q9NU63 452 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BABAM2Q9NXR7 383 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COX16Q9P0S2 106 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COL20A1Q9P218 1284 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SHOC2Q9UQ13 582 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DTX4Q9Y2E6 619 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC9A8Q9Y2E8 581 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MTF2Q9Y483 593 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 PCDHA3Q9Y5H8 950 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PCDHA11Q9Y5I1 949 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FKBP7Q9Y680 259 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 C5P01031 1676 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ROS1P08922 2347 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MAP1AP78559 2803 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF729A6NN14 1252 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 NUDT19A8MXV4 375 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TSTD3H0UI37 97 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LGALS8O00214 317 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 IFRD1O00458 451 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 NRP1O14786 923 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MRASO14807 208 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 KIAA0355O15063 1070 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 XPNPEP2O43895 674 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MED6O75586 246 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RFPL1O75677 317 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EIF3GO75821 320 aaKnown RBP eCLIP2.69□□□□□ -1.98
LIG4-203ENST00000442234 ALPLP05186 524 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ITGB1P05556 798 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SBK2P0C263 348 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 VSIG8P0DPA2 414 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BMP2P12643 396 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PRF1P14222 555 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 NDUFB7P17568 137 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TSPAN8P19075 237 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ATP6V1B2P21281 511 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LAP3P28838 519 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 S100A2P29034 98 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PPM1AP35813 382 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms