RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 FRG1Q14331 258 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 CSHL1Q14406 222 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MORF4L2Q15014 288 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MEP1AQ16819 746 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ANKRD22Q5VYY1 191 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PLAG1Q6DJT9 500 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TTC27Q6P3X3 843 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ABHD13Q7L211 337 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 STRA8Q7Z7C7 330 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 DENND6AQ8IWF6 608 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CPNE9Q8IYJ1 553 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 NKAPQ8N5F7 415 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 MFSD9Q8NBP5 474 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PLPP5Q8NEB5 264 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TRPV3Q8NET8 790 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TTLQ8NG68 377 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 OR51Q1Q8NH59 317 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CD200R1Q8TD46 325 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SLC13A3Q8WWT9 602 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SLCO2A1Q92959 643 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PDLIM5Q96HC4 596 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 CYTH2Q99418 400 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 COL12A1Q99715 3063 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TRIM56Q9BRZ2 755 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 KCNK13Q9HB14 408 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ARL15Q9NXU5 204 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 STOX2Q9P2F5 926 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 GALPQ9UBC7 116 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MED13Q9UHV7 2174 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 RUVBL2Q9Y230 463 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 VWA7Q9Y334 891 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 A0A088AWK7 358 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 OR5H15A6NDH6 313 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ENO4A6NNW6 628 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CCDC188H7C350 402 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PSMD12O00232 456 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 HAT1O14929 419 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PRAMEF2O60811 474 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 LDLRP01130 860 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CD46P15529 392 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ZNF10P21506 573 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 IMPA1P29218 277 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 AHRP35869 848 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 HNMTP50135 292 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TNFSF10P50591 281 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ARL4CP56559 192 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CSNK1G2P78368 415 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 EEF1A2Q05639 463 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 NAE1Q13564 534 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CUL1Q13616 776 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 RCN2Q14257 317 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CRYMQ14894 314 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 HKDC1Q2TB90 917 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 BBS9Q3SYG4 887 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MINDY4Q4G0A6 757 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 KRTCAP3Q53RY4 240 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PRR30Q53SZ7 412 aaPredicted RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 RNASEH2BQ5TBB1 312 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 ZNF549Q6P9A3 640 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MICALCLQ6ZW33 695 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CNTN4Q8IWV2 1026 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 LGI4Q8N135 537 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SLC5A8Q8N695 610 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 PPFIBP2Q8ND30 876 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 BRIX1Q8TDN6 353 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 EEF1AKMT1Q8WVE0 214 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 ALKBH8Q96BT7 664 aaKnown RBP7.36□□□□□ -1.23
CD44-211ENST00000442151 FBXL8Q96CD0 374 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TM4SF19Q96DZ7 209 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 CERS2Q96G23 380 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 MS4A14Q96JA4 679 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SEC16BQ96JE7 1060 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 LPAR4Q99677 370 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 AIF1LQ9BQI0 150 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SARGQ9BW04 601 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 SNX12Q9UMY4 172 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 OSGIN2Q9Y236 505 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 NEU2Q9Y3R4 380 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 KCNE2Q9Y6J6 123 aa7.36□□□□□ -1.23
CD44-211ENST00000442151 TRBC2A0A5B9 178 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 GPR37O15354 613 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 FOXS1O43638 330 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 KLHL18O94889 574 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 STSP08842 583 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 SOX11P35716 441 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 SLC12A2P55011 1212 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 TBPL1P62380 186 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 MPP1Q00013 466 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 BTBD16Q32M84 506 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 TMEM214Q6NUQ4 689 aaKnown RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 PAQR3Q6TCH7 311 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 TMEM207Q6UWW9 146 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 GFRALQ6UXV0 394 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 RPTNQ6XPR3 784 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 SLC26A11Q86WA9 606 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 LRRC56Q8IYG6 542 aaPredicted RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 SLC35F6Q8N357 371 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 TCAIMQ8N3R3 496 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 AMER3Q8N944 861 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms