RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ANKRD28O15084 1053 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF883P0CG24 379 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 HGFP14210 728 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 HOXB9P17482 250 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 VARSP26640 1264 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACVR2AP27037 513 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCL7P80098 99 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 EIF2B5Q13144 721 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 GRB7Q14451 532 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 GRAMD1BQ3KR37 738 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 LAIR2Q6ISS4 152 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 OGFOD2Q6N063 350 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF765Q7L2R6 523 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ERI1Q8IV48 349 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 RHEBL1Q8TAI7 183 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 FAM81AQ8TBF8 368 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SAP25Q8TEE9 199 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC22A18Q96BI1 424 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 FAR2Q96K12 515 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CNBD2Q96M20 576 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CTRCQ99895 268 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NDC1Q9BTX1 674 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRAF6Q9Y4K3 522 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CROCCQ5TZA2 2017 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CACNA1AO00555 2505 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 LAMA2P24043 3122 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CAPN5O15484 640 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NUAK1O60285 661 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SNRPB2P08579 225 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 LTA4HP09960 611 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 C7P10643 843 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ENO3P13929 434 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PKMP14618 531 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 HRH2P25021 359 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 KPNA2P52292 529 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SKP1P63208 163 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACY1Q03154 408 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PHKG1Q16816 387 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CYBRD1Q53TN4 286 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 BLOC1S3Q6QNY0 202 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ISLR2Q6UXK2 745 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CDC26Q8NHZ8 85 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PEX13Q92968 403 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 COL26A1Q96A83 441 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC45A3Q96JT2 553 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRPF18Q99633 342 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC39A3Q9BRY0 314 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRMOQ9BU70 441 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 UNKQ9C0B0 810 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACTL8Q9H568 366 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SYTL2Q9HCH5 934 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ARL15Q9NXU5 204 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCL27Q9Y4X3 112 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 LRRC14BA6NHZ5 514 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NCF1BA6NI72 391 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NCF1CA8MVU1 366 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CDX4O14627 284 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NRP2O60462 931 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 KCNJ13O60928 360 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 RPS17P08708 135 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ANXA5P08758 320 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD59P13987 128 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NCF1P14598 390 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 DCKP27707 260 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 POLR2IP36954 125 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CXADRP78310 365 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 DDX39BQ13838 428 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CLEC6AQ6EIG7 209 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 TTC29Q8NA56 475 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF248Q8NDW4 579 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 B4GALNT2Q8NHY0 566 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CANT1Q8WVQ1 401 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 NPLQ9BXD5 320 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 IL17CQ9P0M4 197 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCDHGB2Q9Y5G2 931 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCDHGA1Q9Y5H4 931 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 TDRD6O60522 2096 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 DENND4CQ5VZ89 1909 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CHD8Q9HCK8 2581 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 CXorf51AA0A1B0GTR3 108 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 AQP12BA6NM10 295 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TCN2P20062 427 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD9P21926 228 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 IL12AP29459 219 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 HNF4AP41235 474 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPLD1P80108 840 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 OCA2Q04671 838 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 EIF3IQ13347 325 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ILKQ13418 452 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 COL9A2Q14055 689 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 RCAN2Q14206 197 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 HIST2H2ACQ16777 129 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 MINDY4Q4G0A6 757 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 HIST2H2AA3Q6FI13 130 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CEACAM20Q6UY09 585 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADAMTSL4Q6UY14 1074 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR180Q86V85 440 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 PPP1R3BQ86XI6 285 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 AQP12AQ8IXF9 295 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms