RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 HENMT1Q5T8I9 393 aaKnown RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 GRTP1Q5TC63 336 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 MROH9Q5TGP6 573 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ERAP2Q6P179 960 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 VHLLQ6RSH7 139 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 KIAA0408Q6ZU52 694 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 SNX20Q7Z614 316 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CMC1Q7Z7K0 106 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 TRABD2AQ86V40 505 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 FJX1Q86VR8 437 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 PRIMA1Q86XR5 153 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 NDUFAF2Q8N183 169 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 RIBC1Q8N443 379 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ZNF808Q8N4W9 903 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 RBMXL3Q8N7X1 1067 aaKnown RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 OR4L1Q8NH43 312 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 LKAAEAR1Q8TD35 194 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 LPGAT1Q92604 370 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CDKL2Q92772 493 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 DTD2Q96FN9 168 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 VPS39Q96JC1 886 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ATP6V1G3Q96LB4 118 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 SRPK1Q96SB4 655 aaKnown RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 RUFY1Q96T51 708 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 NDNQ99608 321 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 KLF6Q99612 283 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 GPR22Q99680 433 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 OLFM1Q99784 485 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CPNE1Q99829 537 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 FOXC2Q99958 501 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 C19orf43Q9BQ61 176 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CCDC77Q9BR77 488 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 NUDT22Q9BRQ3 303 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 C1QTNF7Q9BXJ2 289 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ING2Q9H160 280 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ABCG8Q9H221 673 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 P2RY12Q9H244 342 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CXXC4Q9H2H0 198 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CENPHQ9H3R5 247 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 RHOJQ9H4E5 214 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CAB39LQ9H9S4 337 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 PPCSQ9HAB8 311 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 CATSPERZQ9NTU4 200 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 NFKBIL1Q9UBC1 381 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 B3GNT3Q9Y2A9 372 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 RPH3AQ9Y2J0 694 aaPredicted RBP4.62□□□□□ -1.67
PTPN4-206ENST00000441089 MED16Q9Y2X0 877 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 PKP3Q9Y446 797 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 PCDHGA6Q9Y5G7 932 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 PRSS21Q9Y6M0 314 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 ANKRD36A6QL64 1941 aa4.62□□□□□ -1.67
PTPN4-206ENST00000441089 TRBV23OR9-2A0A075B6M9 112 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GLYATL1P3A0A0U1RQE8 302 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ANKRD34BA5PLL1 514 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 IGLON5A6NGN9 336 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 RHPN2P1A8MT19 583 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 HMGB1P1B2RPK0 211 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GOLGA8RI6L899 631 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 POLR1CO15160 346 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 RAD51BO15315 384 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 B4GAT1O43505 415 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TSPAN6O43657 245 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SGTAO43765 313 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TYROBPO43914 113 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 KLHL41O60662 606 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 MTX2O75431 263 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CEACAM4O75871 244 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 WISP3O95389 354 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SNRPAP09012 282 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GLI4P10075 376 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 THRAP10827 490 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 NAT2P11245 290 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 F8A1P23610 371 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ACRV1P26436 265 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 HTR1BP28222 390 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 HADHAP40939 763 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CD151P48509 253 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SEPHS1P49903 392 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SERPINB9P50453 376 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SUOXP51687 545 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 HMGA2P52926 109 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GYS2P54840 703 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CDKN2DP55273 166 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TAS2R39P59534 338 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PDE1BQ01064 536 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SLC18A2Q05940 514 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CACNG1Q06432 222 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ELP6Q0PNE2 266 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 DLG1Q12959 904 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 BIRC2Q13490 618 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SQSTM1Q13501 440 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ZNF460Q14592 562 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ACOX1Q15067 660 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CDSNQ15517 529 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ZKSCAN8Q15776 578 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 WSCD2Q2TBF2 565 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 FASTKD1Q53R41 847 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CTSL3PQ5NE16 218 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 HECTD2Q5U5R9 776 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms