RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TRMT6Q9UJA5 497 aaKnown RBP11.51□□□□□ -0.57
LTBR-203ENST00000441074 RPS6KA6Q9UK32 745 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SNX8Q9Y5X2 465 aa11.51□□□□□ -0.57
LTBR-203ENST00000441074 SLC28A1O00337 649 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 TEX28O15482 410 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 DPM1O60762 260 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 PRAMEF11O60813 436 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 C9P02748 559 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 ALPPP05187 535 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 IL12RB1P42701 662 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 PXNP49023 591 aaPredicted RBP11.5□□□□□ -0.57
LTBR-203ENST00000441074 ZNF140P52738 457 aaPredicted RBP11.5□□□□□ -0.57
LTBR-203ENST00000441074 VLDLRP98155 873 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 TEKQ02763 1124 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 GPR17Q13304 367 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 GTF2H2Q13888 395 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 PTPRNQ16849 979 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 C10orf62Q5T681 223 aaPredicted RBP11.5□□□□□ -0.57
LTBR-203ENST00000441074 GTF2H2CQ6P1K8 395 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 ZNF367Q7RTV3 350 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 MILR1Q7Z6M3 343 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 CIR1Q86X95 450 aaPredicted RBP11.5□□□□□ -0.57
LTBR-203ENST00000441074 TCTE3Q8IZS6 198 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 RDH10Q8IZV5 341 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 STX19Q8N4C7 294 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 FBXO32Q969P5 355 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 MYEOVQ96EZ4 313 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 IGSF21Q96ID5 467 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 CEP295NLQ96MC4 621 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 VPS35Q96QK1 796 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 SLC22A4Q9H015 551 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 MMP28Q9H239 520 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 AMBNQ9NP70 447 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 SERHLQ9NQF3 203 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 MOSPD1Q9UJG1 213 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 SNX7Q9UNH6 387 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 V9GYH0 126 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 GBF1Q92538 1859 aa11.5□□□□□ -0.57
LTBR-203ENST00000441074 A0A1W2PQ72 361 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 SLC12A8A0AV02 714 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 CCDC182A6NF36 153 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 DRGXA6NNA5 263 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 TFECO14948 347 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 PKMP14618 531 aaKnown RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 HOXB9P17482 250 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 GNPDA1P46926 289 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 ITGA1P56199 1179 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 FAPQ12884 760 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 ASAH1Q13510 395 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 BAK1Q16611 211 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 RAP1GAP2Q684P5 730 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 GPR153Q6NV75 609 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 XKRXQ6PP77 449 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 RNF165Q6ZSG1 346 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 KRT73Q86Y46 540 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 SIDT2Q8NBJ9 832 aaKnown RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 C9orf43Q8TAL5 461 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 MAP6Q96JE9 813 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 ZNF490Q9ULM2 529 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 SLC35F4A4IF30 521 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 CYP7B1O75881 506 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 HSMCR30P0CW71 290 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 PSMA3P25788 255 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 HLA-DMAP28067 261 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 CRISP3P54108 245 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.49□□□□□ -0.57
LTBR-203ENST00000441074 SCN1BQ07699 218 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 HYAL2Q12891 473 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 EFR3AQ14156 821 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 C10orf120Q5SQS8 335 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 FBXL22Q6P050 247 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 TMPRSS11AQ6ZMR5 421 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 ZNF767PQ75MW2 155 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 C16orf59Q7L2K0 433 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 VWA5B2Q8N398 1253 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 ASB15Q8WXK1 588 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 NACC2Q96BF6 587 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 FUBP3Q96I24 572 aaKnown RBP eCLIP11.49□□□□□ -0.57
LTBR-203ENST00000441074 C8orf48Q96LL4 319 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 WDFY2Q96P53 400 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 KCNC2Q96PR1 638 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 EPYCQ99645 322 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 MRPL9Q9BYD2 267 aaKnown RBP11.49□□□□□ -0.57
LTBR-203ENST00000441074 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 IPPKQ9H8X2 491 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 AASDHPPTQ9NRN7 309 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 ZMYM5Q9UJ78 669 aa11.49□□□□□ -0.57
LTBR-203ENST00000441074 COMMD10Q9Y6G5 202 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms