RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HIST2H2AA3Q6FI13 130 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 SHISA6Q6ZSJ9 500 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 ABHD13Q7L211 337 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 VN1R4Q7Z5H5 301 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 PPP1R32Q7Z5V6 425 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 KLHDC8AQ8IYD2 350 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 PRSS58Q8IYP2 241 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 GALNT16Q8N428 558 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 SPATA6LQ8N4H0 392 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 FDCSPQ8NFU4 85 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 METTL21AQ8WXB1 218 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 TSNARE1Q96NA8 513 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 FUT8Q9BYC5 575 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 UNKQ9C0B0 810 aaKnown RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 PITHD1Q9GZP4 211 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 ACSS3Q9H6R3 686 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 PRM3Q9NNZ6 103 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 MLXIPLQ9NP71 852 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 DNAJC11Q9NVH1 559 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CTSFQ9UBX1 484 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 SH2B3Q9UQQ2 575 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 MED13Q9UHV7 2174 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 LAMA5O15230 3695 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 A0A096LPK6 155 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ANKDD1BA6NHY2 528 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SUPT3HB4E1H0 165 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 POC1B-GALNT4F8VUJ3 575 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 P2RX6O15547 441 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SUPT3HO75486 399 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 MED26O95402 600 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 CYC1P08574 325 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SLC35E2BP0CK96 405 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ICAM2P13598 275 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 PLA2G2AP14555 144 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ITGA3P26006 1051 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 CASRP41180 1078 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 GDF5P43026 501 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SLC6A12P48065 614 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 HSPA7P48741 367 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SERPINB8P50452 374 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SOX8P57073 446 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 AP2B1P63010 937 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 MEF2AQ02078 507 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-216ENST00000439475 LAPTM5Q13571 262 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 MYBPC3Q14896 1274 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ACAP2Q15057 778 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 PAGE2BQ5JRK9 111 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 MFSD4BQ5TF39 518 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ATG9BQ674R7 924 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 TRMT10CQ7L0Y3 403 aaKnown RBP9.93□□□□□ -0.82
MCF2L-216ENST00000439475 CMC1Q7Z7K0 106 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ISCA2Q86U28 154 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SNX31Q8N9S9 440 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 KCT2Q8NC54 265 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 PDPRQ8NCN5 879 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 OR9A4Q8NGU2 314 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 OR51Q1Q8NH59 317 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 RHEBL1Q8TAI7 183 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ZCCHC10Q8TBK6 192 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 NT5CQ8TCD5 201 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 EXT2Q93063 718 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 NXNL1Q96CM4 212 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SEC16BQ96JE7 1060 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ALG9Q9H6U8 611 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 CLK4Q9HAZ1 481 aaKnown RBP9.93□□□□□ -0.82
MCF2L-216ENST00000439475 NUDT4Q9NZJ9 180 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 C19orf25Q9UFG5 118 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-216ENST00000439475 PTBP2Q9UKA9 531 aaKnown RBP9.93□□□□□ -0.82
MCF2L-216ENST00000439475 NFU1Q9UMS0 254 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 HS3ST3B1Q9Y662 390 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 SCN3AQ9NY46 2000 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 ZFHX4Q86UP3 3567 aa9.93□□□□□ -0.82
MCF2L-216ENST00000439475 A0A088AWK7 358 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 NSG1A0A0A6YYJ2 146 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 IDSB3KWA1 339 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SOCS6O14544 535 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 TAPBPO15533 448 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 CCNT2O60583 730 aaKnown RBP9.92□□□□□ -0.82
MCF2L-216ENST00000439475 KERAO60938 352 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 KLHL2O95198 593 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 BMP10O95393 424 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 HPP00738 406 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 STATHP02808 62 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SERPINA6P08185 405 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 RHOXF2BP0C7M4 288 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 ACPPP15309 386 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 ALOX12P18054 663 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 IL1RNP18510 177 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 ZNF10P21506 573 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-216ENST00000439475 STXBP1P61764 594 aaKnown RBP9.92□□□□□ -0.82
MCF2L-216ENST00000439475 REEP5Q00765 189 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 IRF8Q02556 426 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 EFTUD2Q15029 972 aaKnown RBP eCLIP9.92□□□□□ -0.823e-6■■□□□ 12
MCF2L-216ENST00000439475 OR4D1Q15615 310 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 MINDY4Q4G0A6 757 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 VWA5B1Q5TIE3 1220 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 KIRREL2Q6UWL6 708 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 TMIGD1Q6UXZ0 262 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms