RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CHST8Q9H2A9 424 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 OSGIN1Q9UJX0 560 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 KRT87PA6NCN2 255 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 YY2O15391 372 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDHGA12O60330 932 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 UGDHO60701 494 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 FKBP9O95302 570 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 C1SP09871 688 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 CD22P20273 847 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 CD70P32970 193 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 PFN3P60673 137 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 RPP38P78345 283 aaKnown RBP15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 CAMK2GQ13555 558 aaPredicted RBP15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 PDE12Q6L8Q7 609 aaKnown RBP15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 TMC8Q8IU68 726 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 SNX29P2Q8IUI4 249 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 RASGRP3Q8IV61 690 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 WDR20Q8TBZ3 569 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 C7orf34Q96L11 122 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 ANKHQ9HCJ1 492 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 KIAA1522Q9P206 1035 aaPredicted RBP15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDHB11Q9Y5F2 797 aa15.83■□□□□ 0.12
CLCNKA-203ENST00000439316 NRG2O14511 850 aaPredicted RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CPSF4O95639 269 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 LCKP06239 509 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RB1P06400 928 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 GJA1P17302 382 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RXRGP48443 463 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CRYBA2P53672 197 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 SNRPD1P62314 119 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 AGAP7PQ5VUJ5 663 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 LIPJQ5W064 366 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 ZDHHC20Q5W0Z9 365 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 ENTHD1Q8IYW4 607 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 UBE2FQ969M7 185 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 LGALS12Q96DT0 336 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 HRASLS5Q96KN8 279 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CORO1BQ9BR76 489 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 TPT1P8Q9HAU6 139 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RASSF1Q9NS23 344 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 SPATA6Q9NWH7 488 aaPredicted RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RUVBL1Q9Y265 456 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 AP1M2Q9Y6Q5 423 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RFPL2O75678 378 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 LAMP1P11279 417 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 SRCP12931 536 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CD36P16671 472 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CSNK2BP67870 215 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 KCNJ10P78508 379 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 IRF8Q02556 426 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 MPP7Q5T2T1 576 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 PLEKHG7Q6ZR37 379 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 AHSA2Q719I0 299 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 CPXM2Q8N436 756 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 KIAA1958Q8N8K9 716 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 STARD8Q92502 1023 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 FCGR1BQ92637 280 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 MRPS31Q92665 395 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 DNASE1L2Q92874 299 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 RPL3LQ92901 407 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 C11orf24Q96F05 449 aaPredicted RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 ATG10Q9H0Y0 220 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 SUV39H2Q9H5I1 410 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 EPS8L2Q9H6S3 715 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 VPS29Q9UBQ0 182 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 LSM7Q9UK45 103 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDHGA6Q9Y5G7 932 aa15.82■□□□□ 0.12
CLCNKA-203ENST00000439316 A0A1W2PRU2 124 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 SCAMP2O15127 329 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 NTRK1P04629 796 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 ATP1B2P14415 290 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 CTSOP43234 321 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 SPINT3P49223 89 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 STK19P49842 368 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 CD300CQ08708 224 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 SERPINA13PQ6UXR4 307 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 NCCRP1Q6ZVX7 275 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 CADM3Q8N126 398 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 FIBINQ8TAL6 211 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 SLC38A4Q969I6 547 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 SH3KBP1Q96B97 665 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 BBS2Q9BXC9 721 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 ITPAQ9BY32 194 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 DSN1Q9H410 356 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 CERS4Q9HA82 394 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 BTNL2Q9UIR0 455 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 BTBD3Q9Y2F9 522 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 C5orf42Q9H799 3197 aa15.81■□□□□ 0.12
CLCNKA-203ENST00000439316 C1orf226A1L170 272 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 UPK3BL1B0FP48 263 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 TMEM229AB2RXF0 380 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 UPK3BL2E5RIL1 263 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 AQP9O43315 295 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 NUDT7P0C024 238 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 EPCAMP16422 314 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PCGF2P35227 344 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PBX2P40425 430 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PXNP49023 591 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 KCNC3Q14003 757 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms