RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DOCK1Q14185 1865 aa2.45□□□□□ -2.02
HMGB1P18-201ENST00000438801 ADGRA3Q8IWK6 1321 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 C2orf16Q68DN1 1984 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 J3QR06 171 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 TGFB1I1O43294 461 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 SEC14L2O76054 403 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 DUS4LO95620 317 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 SELLP14151 372 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 COX6B1P14854 86 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 HARS2P49590 506 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 OLR1P78380 273 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CEBPZQ03701 1054 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 TMEM115Q12893 351 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CSTF3Q12996 717 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 BTG3Q14201 252 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 MVPQ14764 893 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 P2RY6Q15077 328 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 RBMY1FQ15415 496 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 ADIPOQQ15848 244 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 FASTKD1Q53R41 847 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CYP4A22Q5TCH4 519 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 PLPP4Q5VZY2 271 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 DENND5BQ6ZUT9 1274 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZNF534Q76KX8 674 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 RNF168Q8IYW5 571 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CRYBG2Q8N1P7 616 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 DNAJC22Q8N4W6 341 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CERS5Q8N5B7 392 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 SETD7Q8WTS6 366 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 SGCDQ92629 289 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 TOP1MTQ969P6 601 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 FAM149B1Q96BN6 582 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 INTS12Q96CB8 462 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZNF414Q96IQ9 312 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 COG3Q96JB2 828 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 PIGQQ9BRB3 760 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 P2RY12Q9H244 342 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 OLFML3Q9NRN5 406 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 TMOD2Q9NZR1 351 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 CRCT1Q9UGL9 99 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZHX1Q9UKY1 873 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 R3HDM2Q9Y2K5 976 aaKnown RBP2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 POLEQ07864 2286 aa2.44□□□□□ -2.02
HMGB1P18-201ENST00000438801 MYH13Q9UKX3 1938 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 A0A1W2PQF6 199 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 TMEM189-UBE2V1I3L0A0 370 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 SMAD9O15198 467 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 RTN2O75298 545 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 CDC123O75794 336 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 IPO7O95373 1038 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 CXCL10P02778 98 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 DNAH10OSP0CZ25 163 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 NKX2-1P43699 371 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 CCT5P48643 541 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 DHPSP49366 369 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 CRYBB1P53674 252 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 RPS18P62269 152 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 RPL7AP62424 266 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 SPP2Q13103 211 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 UBE2V1Q13404 147 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 NAB2Q15742 525 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 LETM2Q2VYF4 491 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 ZSCAN23Q3MJ62 389 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 GLIPR1L2Q4G1C9 344 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 SLC10A5Q5PT55 438 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 VAX1Q5SQQ9 334 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 PAQR6Q6TCH4 344 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 C16orf47Q6ZP98 133 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 ARMC8Q8IUR7 673 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 FBXL16Q8N461 479 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 L3MBTL4Q8NA19 623 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 OR2T11Q8NH01 316 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 GSDMBQ8TAX9 411 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 COA1Q9GZY4 146 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 MBNL1Q9NR56 388 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 MIOSQ9NXC5 875 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 RRN3Q9NYV6 651 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 TAS2R10Q9NYW0 307 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 FLRT3Q9NZU0 649 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 LRWD1Q9UFC0 647 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 LIMA1Q9UHB6 759 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 DBNLQ9UJU6 430 aaKnown RBP2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 ARHGAP26Q9UNA1 814 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 MOB4Q9Y3A3 225 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 DGKBQ9Y6T7 804 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 MUC4Q99102 2169 aa2.43□□□□□ -2.02
HMGB1P18-201ENST00000438801 DNAH1Q9P2D7 4330 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 ABCA1O95477 2261 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 MED23Q9ULK4 1368 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 NPIPB15A6NHN6 443 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 RRN3P2A6NIE6 340 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 A8MU10 97 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 HCRTR2O43614 444 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 NDUFS3O75489 264 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 EIF3JO75822 258 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 H1F0P07305 194 aaKnown RBP2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 UBL4AP11441 157 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 HOXA6P31267 233 aa2.42□□□□□ -2.02
HMGB1P18-201ENST00000438801 CLDN6P56747 220 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms