RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PTAR1Q7Z6K3 402 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PRUNE1Q86TP1 453 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 NUP93Q8N1F7 819 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CARNMT1Q8N4J0 409 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 DCLK2Q8N568 766 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 ZNF614Q8N883 585 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 OR2T6Q8NHC8 308 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CTCFLQ8NI51 663 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 MGARPQ8TDB4 240 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 AZIN2Q96A70 460 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 BSCL2Q96G97 398 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 LINC00479Q96M42 142 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CFAP53Q96M91 514 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 NECTIN4Q96NY8 510 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 KLHL5Q96PQ7 755 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 USP28Q96RU2 1077 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 INTS14Q96SY0 518 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 NDNQ99608 321 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TRIM51Q9BSJ1 452 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 MLPHQ9BV36 600 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 TDRD1Q9BXT4 1180 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 XPO4Q9C0E2 1151 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 UBQLN3Q9H347 655 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PDRG1Q9NUG6 133 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 LEF1Q9UJU2 399 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 CDH7Q9ULB5 785 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 AGTPBP1Q9UPW5 1226 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PPP1R3CQ9UQK1 317 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 RUVBL2Q9Y230 463 aaKnown RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 PYGO1Q9Y3Y4 419 aa3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 ZFP37Q9Y6Q3 630 aaPredicted RBP3.3□□□□□ -1.88
LSM1P1-201ENST00000438629 RAD54L2Q9Y4B4 1467 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 MYH14Q7Z406 1995 aaKnown RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TRAV18A0A075B6X5 111 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 OOEPA6NGQ2 149 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 YDJCA8MPS7 323 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 C19orf81C9J6K1 198 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 PI4K2BG5E9Z4 385 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 PES1O00541 588 aaKnown RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TPM2P07951 284 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 KRT3P12035 628 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 HLA-DPA1P20036 260 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TCF7P36402 384 aaPredicted RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 HNF4AP41235 474 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 OR3A3P47888 321 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC6A12P48065 614 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 PTENP60484 403 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 HMGN5P82970 282 aaKnown RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 GUCY2DQ02846 1103 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TAB1Q15750 504 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 EXT1Q16394 746 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TAZQ16635 292 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 SUSD4Q5VX71 490 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 BSPRYQ5W0U4 402 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 CYB5D1Q6P9G0 228 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 MACC1Q6ZN28 852 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TMEM182Q6ZP80 229 aaPredicted RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC24A5Q71RS6 500 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 BTN2A1Q7KYR7 527 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 CATSPER4Q7RTX7 472 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 KLHDC1Q8N7A1 406 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 OR4C15Q8NGM1 316 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 GDAP1Q8TB36 358 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 SMAP2Q8WU79 429 aaPredicted RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 CHURC1Q8WUH1 139 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 UBLCP1Q8WVY7 318 aaPredicted RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 CORO2AQ92828 525 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 RIT1Q92963 219 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 ST6GALNAC6Q969X2 333 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TSSK2Q96PF2 358 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 PARK7Q99497 189 aaKnown RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 DNAI2Q9GZS0 605 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 C2orf40Q9H1Z8 148 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 YY1AP1Q9H869 796 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 MINDY3Q9H8M7 445 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 LMAN1LQ9HAT1 526 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 RAVER2Q9HCJ3 691 aaKnown RBP3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 EXOC1Q9NV70 894 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 TBC1D13Q9NVG8 400 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 CACNG5Q9UF02 275 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 MOSPD1Q9UJG1 213 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 FBXL4Q9UKA2 621 aa3.29□□□□□ -1.88
LSM1P1-201ENST00000438629 HEG1Q9ULI3 1381 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CENPJQ9HC77 1338 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 A0A087X002 238 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 IQCMA0A1B0GVH7 501 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ILVBLA1L0T0 632 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 KPNA7A9QM74 516 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 FPGTO14772 594 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 MAGEC1O60732 1142 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ZNF821O75541 412 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 B3GALNT1O75752 331 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 RAD51DO75771 328 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CEACAM4O75871 244 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 TGDSO95455 350 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 TRIM49P0CI25 452 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms