RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PRDM6Q9NQX0 595 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 STOX2Q9P2F5 926 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 ACSL6Q9UKU0 697 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 FAF1Q9UNN5 650 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 IGLV3-16A0A075B6K0 115 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 WASHC1A8K0Z3 465 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 LZTS3O60299 673 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 KCNK5O95279 499 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 IMPA1P29218 277 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ALDH4A1P30038 563 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 PTGER1P34995 402 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 OPRD1P41143 372 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HNF4AP41235 474 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ILF2Q12905 390 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 RAPSNQ13702 412 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 NFE2L1Q14494 772 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HNRNPA1L2Q32P51 320 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.13□□□□□ -0.958e-7■■■■■ 33
CUX1-206ENST00000437600 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 WASH2PQ6VEQ5 465 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TMEM184AQ6ZMB5 413 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 NAGSQ8N159 534 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TMEM132CQ8N3T6 1108 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 PACRGLQ8N7B6 248 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 SMRP1Q8NCR6 262 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 OR7G3Q8NG95 312 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HM13Q8TCT9 377 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 BTN2A2Q8WVV5 523 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 MSLNLQ96KJ4 702 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 LHPPQ9H008 270 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 KCNH6Q9H252 994 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TIMMDC1Q9NPL8 285 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TRBV5-3A0A0A0MS03 114 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 GRXCR2A6NFK2 248 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 H3BMQ9 156 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 WNT9AO14904 365 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 C8GP07360 202 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 GZMMP51124 257 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 WNT3P56703 355 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 IL5RAQ01344 420 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 RUNX3Q13761 415 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 DGCR6Q14129 220 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 ZBED5Q49AG3 693 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CCDC92Q53HC0 331 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 C2orf27AQ580R0 203 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 LAIR2Q6ISS4 152 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 NCCRP1Q6ZVX7 275 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 USP51Q70EK9 711 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 RTL10Q7L3V2 364 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 FAM20CQ8IXL6 584 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 SUSD6Q92537 303 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 GLYATL1Q969I3 302 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CIDECQ96AQ7 238 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 PYURFQ96I23 114 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 COG8Q96MW5 612 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 FAM129BQ96TA1 746 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 CDX2Q99626 313 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 OSBPL10Q9BXB5 764 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 C5AR2Q9P296 337 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 DNAJB9Q9UBS3 223 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 A0A0G2JN53 185 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 LOC100130705A0A1B0GUX0 176 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 EVPLLA8MZ36 301 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 RTCAO00442 366 aaKnown RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 TOR1BO14657 336 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 PCDH7O60245 1069 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 SCN2BO60939 215 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 INMTO95050 263 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 KAT7O95251 611 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 BMP10O95393 424 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 C6P13671 934 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 ADRB3P13945 408 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 POU2F1P14859 743 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 ZNF30P17039 623 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 NAA20P61599 178 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CYP4F2P78329 520 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 COX20Q5RI15 118 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CCNYL2Q5T2Q4 361 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 FAAH2Q6GMR7 532 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 LAIR1Q6GTX8 287 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 THAP5Q7Z6K1 395 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 TECPR1Q7Z6L1 1165 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 DCP2Q8IU60 420 aaKnown RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 SLC44A2Q8IWA5 706 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 YAF2Q8IY57 180 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 PLA2G15Q8NCC3 412 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 GLB1L3Q8NCI6 653 aaPredicted RBP9.12□□□□□ -0.95
CUX1-206ENST00000437600 ZNF480Q8WV37 535 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 OR8D1Q8WZ84 308 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 SNX19Q92543 992 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CCDC138Q96M89 665 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 CSF3RQ99062 836 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 TPT1P8Q9HAU6 139 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 TRIM39Q9HCM9 518 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 TMEM184CQ9NVA4 438 aa9.12□□□□□ -0.95
CUX1-206ENST00000437600 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms