RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 FAM72AQ5TYM5 149 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 ARHGEF16Q5VV41 709 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 FAM72DQ6L9T8 149 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 KIAA1161Q6NSJ0 714 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 C19orf48Q6RUI8 117 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 FAM72BQ86X60 149 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 APCDD1Q8J025 514 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 LSMEM2Q8N112 164 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 FAM89BQ8N5H3 189 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 RTL3Q8N8U3 475 aaKnown RBP4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 GBP7Q8N8V2 638 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 GPRC5AQ8NFJ5 357 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 ULK4Q96C45 1275 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 GIMAP5Q96F15 307 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 C4orf45Q96LM5 186 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 PANX3Q96QZ0 392 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 NKX3-1Q99801 234 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 TRIM7Q9C029 511 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 CTNNA3Q9UI47 895 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 HOOK1Q9UJC3 728 aaKnown RBP4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 NOCTQ9UK39 431 aaKnown RBP4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 DUSP12Q9UNI6 340 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 NCKAP1Q9Y2A7 1128 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 COLEC10Q9Y6Z7 277 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 NPHP3Q7Z494 1330 aa4.11□□□□□ -1.75
HMGB1P45-201ENST00000435986 ARID2Q68CP9 1835 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SMIM30A4D0T7 59 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ERICH4A6NGS2 130 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 C2CD4DB7Z1M9 353 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 M0R296 226 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 CLN5O75503 358 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SLC22A3O75751 556 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 OLFM2O95897 454 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 DARSP14868 501 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 RPS2P15880 293 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ZNF18P17022 549 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 MAGEA11P43364 429 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 DNA2P51530 1060 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SH3BGRP55822 239 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 RPP38P78345 283 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 IL1RL1Q01638 556 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 MRPL28Q13084 256 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 TEAD2Q15562 447 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ZRSR1Q15695 479 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SGCBQ16585 318 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ZC2HC1CQ53FD0 456 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 AGAP6Q5VW22 663 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 UGT3A1Q6NUS8 523 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 PODNL1Q6PEZ8 512 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 RBMS3Q6XE24 437 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 MARK2Q7KZI7 788 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 FCRLAQ7L513 359 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 MIER3Q7Z3K6 550 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 TMEM126BQ8IUX1 230 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 KBTBD3Q8NAB2 608 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 PIK3R3Q92569 461 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ARHGAP45Q92619 1136 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 BCL2L2Q92843 193 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 RBM18Q96H35 190 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 UHRF2Q96PU4 802 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 LPAR4Q99677 370 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 FAM213AQ9BRX8 229 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SPXQ9BT56 116 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 OSBPL8Q9BZF1 889 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 NYXQ9GZU5 481 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ABCG8Q9H221 673 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 ZFP57Q9NU63 452 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 INTS10Q9NVR2 710 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 DONSONQ9NYP3 566 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 IL19Q9UHD0 177 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 KCNJ14Q9UNX9 436 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 TDRKHQ9Y2W6 561 aaKnown RBP4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 SELENOKQ9Y6D0 94 aa4.1□□□□□ -1.75
HMGB1P45-201ENST00000435986 TRBV2A0A0J9YWF9 115 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 MAGEB16A2A368 324 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 SMIM1B2RUZ4 78 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 E5RGE8 158 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 AKAP3O75969 853 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 EML2O95834 649 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 CLPTM1O96005 669 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 TSHBP01222 138 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 RAF1P04049 648 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 F3P13726 295 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 PLA2G2AP14555 144 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 ANOS1P23352 680 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 MARK3P27448 753 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 DCTP40126 519 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 NR0B1P51843 470 aaKnown RBP4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 TSTA3Q13630 321 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 KIAA1644Q3SXP7 199 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 ZNF718Q3SXZ3 478 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 ANKDD1AQ495B1 522 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 HSP90AB3PQ58FF7 597 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 XKR6Q5GH73 641 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 SUSD4Q5VX71 490 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 KCTD11Q693B1 232 aa4.09□□□□□ -1.75
HMGB1P45-201ENST00000435986 PM20D1Q6GTS8 502 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 275.7 ms