RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MED8Q96G25 268 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 HHIPL1Q96JK4 782 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 IRF2BPLQ9H1B7 796 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 RC3H2Q9HBD1 1191 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SPG21Q9NZD8 308 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PDP1Q9P0J1 537 aaPredicted RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ENPP5Q9UJA9 477 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF451Q9Y4E5 1061 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 MAGEB17A8MXT2 336 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 EVPLLA8MZ36 301 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 LILRB3O75022 631 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 POP4O95707 220 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SEMG1P04279 462 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CTSAP10619 480 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 GPX2P18283 190 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CYP2A7P20853 494 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PRPS1L1P21108 318 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 RAE1P78406 368 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 IQCCQ4KMZ1 466 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PAGE2BQ5JRK9 111 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 THOC6Q86W42 341 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CYB5D2Q8WUJ1 264 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 C11orf24Q96F05 449 aaPredicted RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 RASSF1Q9NS23 344 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 VPS29Q9UBQ0 182 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SAMD4AQ9UPU9 718 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SNX5Q9Y5X3 404 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 HCFC2Q9Y5Z7 792 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 TMEM229AB2RXF0 380 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TSPAN6O43657 245 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NDUFS2O75306 463 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FKBP9O95302 570 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NTRK1P04629 796 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TGFBR1P36897 503 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 BDKRB1P46663 353 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GAB1Q13480 694 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 DGCR6Q14129 220 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FKBP9P1Q75LS8 142 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC22A16Q86VW1 577 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GATAD2AQ86YP4 633 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ELMOD2Q8IZ81 293 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TCAIMQ8N3R3 496 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GPR156Q8NFN8 814 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NACC2Q96BF6 587 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TPD52L3Q96J77 140 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FCRL1Q96LA6 429 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 RIOK2Q9BVS4 552 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 CPEB1Q9BZB8 566 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 PRDM8Q9NQV8 689 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TMEM184CQ9NVA4 438 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 AP3M1Q9Y2T2 418 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SAMHD1Q9Y3Z3 626 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TRAV19A0A0A6YYK7 116 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GABRR3A8MPY1 467 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 CCL16O15467 120 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 LEFTY1O75610 366 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GBAP04062 536 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ITGAMP11215 1152 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ACPPP15309 386 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ITIH1P19827 911 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TNFRSF1BP20333 461 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 MAPK1P28482 360 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 PDHA2P29803 388 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 HPCAL1P37235 193 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC35A2P78381 396 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NPTX1Q15818 432 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 HKDC1Q2TB90 917 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ZC3H12BQ5HYM0 836 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 GDPD4Q6W3E5 623 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 C1orf52Q8N6N3 182 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 PSMA8Q8TAA3 256 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF641Q96N77 438 aaPredicted RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FAM83DQ9H4H8 585 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TPT1P8Q9HAU6 139 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 C12orf4Q9NQ89 552 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 CAB39Q9Y376 341 aaPredicted RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ORC6Q9Y5N6 252 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 KIAA1671Q9BY89 1806 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NPIPB8E9PQR5 432 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 EPN2O95208 641 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC16A8O95907 504 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FABP3P05413 133 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 C8AP07357 584 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 CCDC159P0C7I6 412 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 RPS3AP61247 264 aaKnown RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 FPGSQ05932 587 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC13A2Q13183 592 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SELENBP1Q13228 472 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ADPRMQ3LIE5 342 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ATAD3BQ5T9A4 648 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 NEK10Q6ZWH5 1172 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 ADIPOR2Q86V24 386 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms