RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PCNAP12004 261 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 ZNF8P17098 575 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 GPX2P18283 190 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 ACADLP28330 430 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 GSTT1P30711 240 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 RPL3P39023 403 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 PEX19P40855 299 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 MRPS21P82921 87 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 TAP2Q03519 686 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 BIRC2Q13490 618 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 CYBRD1Q53TN4 286 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 TTC33Q6PID6 262 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 ABRAXAS1Q6UWZ7 409 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 KIAA1324Q6UXG2 1013 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 HDDC3Q8N4P3 179 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 C1orf52Q8N6N3 182 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 CYGBQ8WWM9 190 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 TMBIM1Q969X1 311 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 YTHDF1Q9BYJ9 559 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 RSPH9Q9H1X1 276 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 PAPOLBQ9NRJ5 636 aaKnown RBP11.5□□□□□ -0.57
CTCFL-209ENST00000433949 BTNL2Q9UIR0 455 aa11.5□□□□□ -0.57
CTCFL-209ENST00000433949 UPK1AO00322 258 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 SCN2BO60939 215 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 DCNP07585 359 aaKnown RBP11.49□□□□□ -0.57
CTCFL-209ENST00000433949 KELP23276 732 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 TIA1P31483 386 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■□ 23.2
CTCFL-209ENST00000433949 HSD17B2P37059 387 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PXNP49023 591 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-209ENST00000433949 DAG1Q14118 895 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 GAS6Q14393 721 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 ARHGAP19Q14CB8 494 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 AGERQ15109 404 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 NADK2Q4G0N4 442 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 FBXO43Q4G163 708 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PYCR3Q53H96 274 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PIP5KL1Q5T9C9 394 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 CPTPQ5TA50 214 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 DOK6Q6PKX4 331 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 SLC30A9Q6PML9 568 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PDZD3Q86UT5 571 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 AMZ2Q86W34 360 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 ALDH16A1Q8IZ83 802 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 GALNT15Q8N3T1 639 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 OR7A2PQ8NGA2 310 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 SLC5A11Q8WWX8 675 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 GFM2Q969S9 779 aaKnown RBP11.49□□□□□ -0.57
CTCFL-209ENST00000433949 AURKBQ96GD4 344 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PHF12Q96QT6 1004 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 OR52A5Q9H2C5 316 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 TBC1D17Q9HA65 648 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 VCX3AQ9NNX9 186 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 PRM3Q9NNZ6 103 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 LTB4R2Q9NPC1 389 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 AASDHPPTQ9NRN7 309 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 FBXL12Q9NXK8 326 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 DMTF1Q9Y222 760 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 WDFY4Q6ZS81 3184 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
CTCFL-209ENST00000433949 A0A087WXM4 84 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 G3V2T6 193 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 GNGT2O14610 69 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PRKD3O94806 890 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ADH1BP00325 375 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PDGFBP01127 241 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 MT-ND1P03886 318 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ALPLP05186 524 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 GSNP06396 782 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 DRD3P35462 400 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PIK3CBP42338 1070 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 CDKN2CP42773 168 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 WNT3P56703 355 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ZNF763Q0D2J5 394 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ZNF776Q68DI1 518 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 TMEM214Q6NUQ4 689 aaKnown RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PNCKQ6P2M8 343 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 LCTLQ6UWM7 567 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ENPP6Q6UWR7 440 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 R3HCC1LQ7Z5L2 792 aaKnown RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 C11orf96Q7Z7L8 435 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 LRRTM4Q86VH4 590 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 DCUN1D3Q8IWE4 304 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 LRRC56Q8IYG6 542 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 CLEC4FQ8N1N0 589 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ZCCHC7Q8N3Z6 543 aaKnown RBP11.48□□□□□ -0.57
CTCFL-209ENST00000433949 RNF175Q8N4F7 328 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ZFP28Q8NHY6 868 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ZFAND2BQ8WV99 257 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PYURFQ96I23 114 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 SHDQ96IW2 340 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 ATAD3AQ9NVI7 634 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 RPS6KA6Q9UK32 745 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 GNG14A0A1W2PPG7 69 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
CTCFL-209ENST00000433949 TRIM64A6NGJ6 449 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms