RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 SLC26A1Q9H2B4 701 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 LIME1Q9H400 295 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SOX17Q9H6I2 414 aaPredicted RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 GRPEL1Q9HAV7 217 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SLC24A3Q9HC58 644 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 IARS2Q9NSE4 1012 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 PLA2G3Q9NZ20 509 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 FBXO5Q9UKT4 447 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 EDARQ9UNE0 448 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SNRNP200O75643 2136 aaKnown RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 FITM1A5D6W6 292 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 E9PLN8 166 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 PROM1O43490 865 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 TPBGLP0DKB5 382 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 FDXRP22570 491 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MCM3P25205 808 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 ARNTP27540 789 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MSX1P28360 303 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 PCSK6P29122 969 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 SOX11P35716 441 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 OR1D4P47884 311 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 EMP3P54852 163 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 TFF3Q07654 80 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 ILF2Q12905 390 aaKnown RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MYBPHQ13203 477 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CTBP1Q13363 440 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CUL1Q13616 776 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 GRB7Q14451 532 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 NKG7Q16617 165 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 ANKRD22Q5VYY1 191 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 SUSD1Q6UWL2 747 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 KIAA0408Q6ZU52 694 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CENPUQ71F23 418 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CAND1Q86VP6 1230 aaKnown RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 DENND6AQ8IWF6 608 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 EID3Q8N140 333 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 GPATCH11Q8N954 259 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 FBXO15Q8NCQ5 510 aaPredicted RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 AGAP11Q8TF27 550 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 METTL21AQ8WXB1 218 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MBD6Q96DN6 1003 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 GPR137Q96N19 417 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 DMRTA2Q96SC8 542 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 GPR21Q99679 349 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 VKORC1Q9BQB6 163 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 PLCD4Q9BRC7 762 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MENTQ9BUN1 341 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 ZNF358Q9NW07 568 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 C19orf25Q9UFG5 118 aaPredicted RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 PCYOX1Q9UHG3 505 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 CORO1CQ9ULV4 474 aaPredicted RBP9.73□□□□□ -0.85
HOXD3-203ENST00000432796 SNX12Q9UMY4 172 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 PLEKHA6Q9Y2H5 1048 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 DHRS7Q9Y394 339 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 KLK4Q9Y5K2 254 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 MAU2Q9Y6X3 613 aa9.73□□□□□ -0.85
HOXD3-203ENST00000432796 NUP210LQ5VU65 1888 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 NSG1A0A0A6YYJ2 146 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 OR2A25A4D2G3 310 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 H3BMH7 237 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 DNALI1O14645 258 aaPredicted RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CTAG2O75638 210 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 MLYCDO95822 493 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 SLC16A8O95907 504 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 HPP00738 406 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 HEXBP07686 556 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 HOXD4P09016 255 aaPredicted RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CLCN7P51798 805 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 DGKQP52824 942 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 ARL4CP56559 192 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 RPS15AP62244 130 aaKnown RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 GBX1Q14549 363 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CRYMQ14894 314 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 BBS9Q3SYG4 887 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 KRTCAP3Q53RY4 240 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 HSP90AA5PQ58FG0 334 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 MFSD4BQ5TF39 518 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 NIPAL1Q6NVV3 410 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 TTC27Q6P3X3 843 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CAMKMTQ7Z624 323 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CPNE9Q8IYJ1 553 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 NAT8LQ8N9F0 302 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 OR11G2Q8NGC1 345 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 OR2A1Q8NGT9 310 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 SUN3Q8TAQ9 357 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 ATL1Q8WXF7 558 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 ALKBH8Q96BT7 664 aaKnown RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 THAP11Q96EK4 314 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 MMABQ96EY8 250 aaPredicted RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 RMND5BQ96G75 393 aaPredicted RBP9.72□□□□□ -0.85
HOXD3-203ENST00000432796 CCDC138Q96M89 665 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 PKP4Q99569 1192 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 FAM129AQ9BZQ8 928 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 DRC3Q9H069 523 aa9.72□□□□□ -0.85
HOXD3-203ENST00000432796 PRM3Q9NNZ6 103 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms