RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ANKDD1BA6NHY2 528 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 PSMD12O00232 456 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 KHNYNO15037 678 aaKnown RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 TNFSF14O43557 240 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 NUDT21O43809 227 aaKnown RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 UBXN7O94888 489 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 ALPPL2P10696 532 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 GRIA3P42263 894 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 SCTRP47872 440 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 ACADVLP49748 655 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 CCT8P50990 548 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 EPHA4P54764 986 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 DIO3P55073 304 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 RPS13P62277 151 aaKnown RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 RPS6KA2Q15349 733 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 SPRED3Q2MJR0 410 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 PDCD4Q53EL6 469 aaKnown RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 PAQR7Q86WK9 346 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 ANKRD53Q8N9V6 530 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 FCRL1Q96LA6 429 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 SERPINI1Q99574 410 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 C1orf50Q9BV19 199 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 TMEM121BQ9BXQ6 578 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 TMEM9BQ9NQ34 198 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 TMEM45AQ9NWC5 275 aa17.47■□□□□ 0.39
HMGN1-206ENST00000431390 FEZF1A0PJY2 475 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 RHPN2P1A8MT19 583 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 ARHGAP33O14559 1287 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 CDX4O14627 284 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-206ENST00000431390 OR1F1O43749 312 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 ESRRAP11474 423 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-206ENST00000431390 AMD1P17707 334 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 GPX3P22352 226 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 MAPK1P28482 360 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 RELAQ04206 551 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 MAPRE2Q15555 327 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 IL23RQ5VWK5 629 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 ZCCHC8Q6NZY4 707 aaKnown RBP17.46■□□□□ 0.39
HMGN1-206ENST00000431390 ZNF438Q7Z4V0 828 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 VN1R5Q7Z5H4 357 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 FAM20CQ8IXL6 584 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 SLC35F3Q8IY50 421 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 OR4C6Q8NH72 309 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 RSC1A1Q92681 617 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 ZUFSPQ96AP4 578 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 APIPQ96GX9 242 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 FSCN3Q9NQT6 498 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 POMT2Q9UKY4 750 aa17.46■□□□□ 0.39
HMGN1-206ENST00000431390 POLR3HQ9Y535 204 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-206ENST00000431390 A0A0J9YY10 115 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 OR2A25A4D2G3 310 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 HAT1O14929 419 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ZW10O43264 779 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 THRAP10827 490 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 PRPS2P11908 318 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 GLB1P16278 677 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 PTX3P26022 381 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 AHRP35869 848 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CAPZBP47756 277 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RASSF2P50749 326 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 HNRNPH2P55795 449 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CUL3Q13618 768 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 SPIN4Q56A73 249 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CACHD1Q5VU97 1274 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 FAM9CQ8IZT9 166 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 KDF1Q8NAX2 398 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RP9Q8TA86 221 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 EPB41L1Q9H4G0 881 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ACTR5Q9H9F9 607 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 PRM3Q9NNZ6 103 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 SIRT5Q9NXA8 310 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ZIM2Q9NZV7 527 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 LRIT1Q9P2V4 623 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RUVBL1Q9Y265 456 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RNF215Q9Y6U7 377 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 LCMT2O60294 686 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CLEC3AO75596 197 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ETHE1O95571 254 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 COX4I1P13073 169 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CEACAM1P13688 526 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 HOXB3P14651 431 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 EZRP15311 586 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 TYRP1P17643 537 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CSRP1P21291 193 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 GPR3P46089 330 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 MNAT1P51948 309 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RPS15AP62244 130 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ACSM2AQ08AH3 577 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 TBL3Q12788 808 aaKnown RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 COL9A2Q14055 689 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 NR1D2Q14995 579 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 ACSM2BQ68CK6 577 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CYP20A1Q6UW02 462 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 OR6C4Q8NGE1 309 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 CHTF18Q8WVB6 975 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 C11orf24Q96F05 449 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-206ENST00000431390 SCNM1Q9BWG6 230 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 MS4A8Q9BY19 250 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 RAB33BQ9H082 229 aa17.45■□□□□ 0.38
HMGN1-206ENST00000431390 IL21RQ9HBE5 538 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms