RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
SEC13-211ENST00000431352 CAMKVQ8NCB2 501 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 MCUQ8NE86 351 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 DNAJB8Q8NHS0 232 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 CALML6Q8TD86 181 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 EEF1AKMT1Q8WVE0 214 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 TSLPQ969D9 159 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 PEX11GQ96HA9 241 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 PDE10AQ9Y233 779 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 NAALAD2Q9Y3Q0 740 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 CSMD1Q96PZ7 3565 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 MYO7BQ6PIF6 2116 aa13.12□□□□□ -0.31
SEC13-211ENST00000431352 MAN1A2O60476 641 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SLC19A2O60779 497 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 BANF1O75531 89 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SERPIND1P05546 499 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 HRH2P25021 359 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 CA7P43166 264 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 RGS4P49798 205 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 OLR1P78380 273 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 ACTN3Q08043 901 aaPredicted RBP13.11□□□□□ -0.31
SEC13-211ENST00000431352 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 OR1C1Q15619 314 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 PHKG1Q16816 387 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 RBM20Q5T481 1227 aaKnown RBP13.11□□□□□ -0.31
SEC13-211ENST00000431352 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
SEC13-211ENST00000431352 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 MYO1HQ8N1T3 1032 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 OR5T3Q8NGG3 340 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SLC13A3Q8WWT9 602 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 MOCOSQ96EN8 888 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 MAGED4Q96JG8 741 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SIGLEC12Q96PQ1 595 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 PCBD2Q9H0N5 130 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SLC17A6Q9P2U8 582 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 TINAGQ9UJW2 476 aa13.11□□□□□ -0.31
SEC13-211ENST00000431352 SCN3AQ9NY46 2000 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 KCNE1BA0A087WTH5 132 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 TTI1O43156 1089 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 NDUFS4O43181 175 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 LCMT2O60294 686 aaKnown RBP13.1□□□□□ -0.31
SEC13-211ENST00000431352 B3GALT4O96024 378 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 C8GP07360 202 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 HTR1EP28566 365 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 GRK3P35626 688 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 MAGEA3P43357 314 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 AGTR2P50052 363 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PGGT1BP53609 377 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 CASP6P55212 293 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 CDKN2DP55273 166 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 OC90Q02509 493 aaPredicted RBP13.1□□□□□ -0.31
SEC13-211ENST00000431352 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
SEC13-211ENST00000431352 SP140Q13342 867 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 ART3Q13508 389 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 CRYMQ14894 314 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 NSDHLQ15738 373 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 EXT1Q16394 746 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 C3AR1Q16581 482 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 CAPN13Q6MZZ7 669 aaPredicted RBP13.1□□□□□ -0.31
SEC13-211ENST00000431352 LRRC8EQ6NSJ5 796 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 UGT3A1Q6NUS8 523 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PAQR3Q6TCH7 311 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 LMNTD2Q8IXW0 634 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 NAT8LQ8N9F0 302 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PYCR2Q96C36 320 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 SIGLEC10Q96LC7 697 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 NPAS2Q99743 824 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 UTP23Q9BRU9 249 aaKnown RBP13.1□□□□□ -0.31
SEC13-211ENST00000431352 RUBCNLQ9H714 662 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PPP2R2CQ9Y2T4 447 aa13.1□□□□□ -0.31
SEC13-211ENST00000431352 PABPN1LA6NDY0 278 aaKnown RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 GABRR3A8MPY1 467 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 EIF3FO00303 357 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 OR1F1O43749 312 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 CYC1P08574 325 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 PGAM1P18669 254 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 EEF1DP29692 281 aaKnown RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 CD96P40200 585 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 CCR8P51685 355 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 OR4D2P58180 307 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 TIAL1Q01085 375 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC13-211ENST00000431352 RHAGQ02094 409 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 MEP1AQ16819 746 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 RPTNQ6XPR3 784 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 BNC2Q6ZN30 1099 aaPredicted RBP13.09□□□□□ -0.31
SEC13-211ENST00000431352 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
SEC13-211ENST00000431352 RASGEF1CQ8N431 466 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms