RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 AP1M2Q9Y6Q5 423 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 PLXND1Q9Y4D7 1925 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 TMEM229AB2RXF0 380 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 PI15O43692 258 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 EPHX1P07099 455 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 TEAD1P28347 426 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 PIGAP37287 484 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 CDK3Q00526 305 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 BIRC2Q13490 618 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 STARD3Q14849 445 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 C16orf72Q14CZ0 275 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 MPEG1Q2M385 716 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 WSCD2Q2TBF2 565 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 ZC3H12BQ5HYM0 836 aaKnown RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 FAM71E1Q6IPT2 247 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 SHQ1Q6PI26 577 aaKnown RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 EIF3MQ7L2H7 374 aaKnown RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 HEATR4Q86WZ0 1026 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 CLEC4FQ8N1N0 589 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 GPR156Q8NFN8 814 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 WDR48Q8TAF3 677 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 NPLQ9BXD5 320 aaPredicted RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 ASPSCR1Q9BZE9 553 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 RSPH9Q9H1X1 276 aaPredicted RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 REEP4Q9H6H4 257 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 MYNNQ9NPC7 610 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 THEGQ9P2T0 379 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 CDH7Q9ULB5 785 aa13.41□□□□□ -0.26
HOXC4-202ENST00000430889 DNMT3AQ9Y6K1 912 aaPredicted RBP13.41□□□□□ -0.26
HOXC4-202ENST00000430889 DPM1O60762 260 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SH3BGRLO75368 114 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SEC24DO94855 1032 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 FURINP09958 794 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 KELP23276 732 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PPIBP23284 216 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PCSK6P29122 969 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CTBSQ01459 385 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PLCL1Q15111 1095 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 ZBED5Q49AG3 693 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 FAM46CQ5VWP2 391 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 TTC23Q5W5X9 447 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SPESP1Q6UW49 350 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PIWIL3Q7Z3Z3 882 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 HIPK1Q86Z02 1210 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 DCUN1D3Q8IWE4 304 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 OR5AR1Q8NGP9 310 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 OR10Q1Q8NGQ4 319 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 FBLIM1Q8WUP2 373 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 RAD51AP1Q96B01 352 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 IL17FQ96PD4 163 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 DPH2Q9BQC3 489 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 TEX101Q9BY14 249 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 TM9SF3Q9HD45 589 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 ABCG2Q9UNQ0 655 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 NUMA1Q14980 2115 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 REV3LO60673 3130 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 IGLON5A6NGN9 336 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF701M0R085 212 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 MID1O15344 667 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SLC16A6O15403 523 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 GCM2O75603 506 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CPNE6O95741 557 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 EFNA1P20827 205 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PCGF2P35227 344 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 KCNAB2Q13303 367 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CAMK2GQ13555 558 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 ARHGAP19Q14CB8 494 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 RGNQ15493 299 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CYP2A13Q16696 494 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PRSS53Q2L4Q9 553 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 METRNLQ641Q3 311 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 LAIR2Q6ISS4 152 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 TMEM184AQ6ZMB5 413 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 THAP5Q7Z6K1 395 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 LRRTM4Q86VH4 590 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 AMZ2Q86W34 360 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 DCP2Q8IU60 420 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF740Q8NDX6 193 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CDC26Q8NHZ8 85 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PNPT1Q8TCS8 783 aaKnown RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 C16orf78Q8WTQ4 265 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 SDCCAG3Q96C92 435 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CERS4Q9HA82 394 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 DDX18Q9NVP1 670 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms