RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SPSB2Q99619 263 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 TRIM54Q9BYV2 358 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 MRPS30Q9NP92 439 aaKnown RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 ENAMQ9NRM1 1142 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 P4HTMQ9NXG6 502 aa16.14■□□□□ 0.17
UBE3D-204ENST00000430071 USP9YO00507 2555 aaPredicted RBP16.14■□□□□ 0.17
UBE3D-204ENST00000430071 HYKKA2RU49 373 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-204ENST00000430071 PYGBP11216 843 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 KRT15P19012 456 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 RPA3P35244 121 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HSD17B2P37059 387 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ARSFP54793 590 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 CDKL1Q00532 357 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 TGFBIQ15582 683 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 TCTE1Q5JU00 501 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 DCAF10Q5QP82 559 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ZNF425Q6IV72 752 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 AGTRAPQ6RW13 159 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 GPSM1Q86YR5 675 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 PRSS58Q8IYP2 241 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 CNPY4Q8N129 248 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 RIBC1Q8N443 379 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-204ENST00000430071 Q8NA96 180 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ACMSDQ8TDX5 336 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 FBXL8Q96CD0 374 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ATOH8Q96SQ7 321 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 PLCD4Q9BRC7 762 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ATG10Q9H0Y0 220 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ZBTB20Q9HC78 741 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-204ENST00000430071 RNF112Q9ULX5 631 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 SH2B3Q9UQQ2 575 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 NAV2Q8IVL1 2488 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 P2RX6O15547 441 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 KERAO60938 352 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 COL6A2P12110 1019 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ACAP2Q15057 778 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 HKDC1Q2TB90 917 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 PRTGQ2VWP7 1150 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 KRT71Q3SY84 523 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ICE2Q659A1 982 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 FRA10AC1Q70Z53 315 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 TTC29Q8NA56 475 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-204ENST00000430071 STAG3L4Q8TBR4 150 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 EXT2Q93063 718 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 CABS1Q96KC9 395 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 ZFYVE21Q9BQ24 234 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 C17orf62Q9BQA9 187 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 GPR83Q9NYM4 423 aa16.13■□□□□ 0.17
UBE3D-204ENST00000430071 CPAMD8Q8IZJ3 1885 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 PABPN1LA6NDY0 278 aaKnown RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 NCF1BA6NI72 391 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 ZNF839A8K0R7 811 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 NCF1CA8MVU1 366 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 SOCS6O14544 535 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 HAT1O14929 419 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 NCF1P14598 390 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 TBPL1P62380 186 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 PRDX1Q06830 199 aaKnown RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 NAE1Q13564 534 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 C18orf21Q32NC0 220 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 TECRLQ5HYJ1 363 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 LAPTM4BQ86VI4 370 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 RHEBL1Q8TAI7 183 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 FKBP10Q96AY3 582 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 RHBDF1Q96CC6 855 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 OR2A5Q96R48 311 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 SMAD5Q99717 465 aaKnown RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 EGFL8Q99944 293 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 RUVBL1Q9Y265 456 aaKnown RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 MRPS2Q9Y399 296 aaKnown RBP16.12■□□□□ 0.17
UBE3D-204ENST00000430071 HS3ST3B1Q9Y662 390 aa16.12■□□□□ 0.17
UBE3D-204ENST00000430071 DIDO1Q9BTC0 2240 aaKnown RBP16.11■□□□□ 0.17
UBE3D-204ENST00000430071 VSTM2BA6NLU5 285 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 TTLL8A6PVC2 850 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 UBXN8O00124 270 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 SORBS2O94875 1100 aaKnown RBP16.11■□□□□ 0.17
UBE3D-204ENST00000430071 ANXA5P08758 320 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 MTHFD2P13995 350 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 RRADP55042 308 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 CASP8Q14790 479 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 TSNAXIP1Q2TAA8 658 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 VWA2Q5GFL6 755 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 CEP85LQ5SZL2 805 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 JMJD6Q6NYC1 403 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-204ENST00000430071 KLC3Q6P597 504 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 KIRREL2Q6UWL6 708 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 TRABD2AQ86V40 505 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 GALNT16Q8N428 558 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 TMEM151AQ8N4L1 468 aa16.11■□□□□ 0.17
UBE3D-204ENST00000430071 ARHGEF39Q8N4T4 335 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms